Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017449_2                                                                                                                 top


Strain : Francisella cf. novicida 3523 RefSeq :NC_017449 (chromosome circular)
CRISPR id : NC_017449_2
DR consensus (37 bp) : GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGNumber of repetitions :19
Begin Position : 1125862 End Position : 1127188

1125862GTTTCGGTAGCTAGGTTATTTGATGTACAATAAAAACTTACCTGTTTGATGCTAGGTATTAGTGTTAT 1125929
1125930TTATAAGTAGCTAGATTATTTGATATACTGCTGTTAGGGTATGACAATGACTATAACCAACACTCGTCCAGA 1126001
1126002GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTTTTCTTAATCTTAGGGTATCTAAATACAAATTCTCT 1126075
1126076GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGAATAAGCATTTCAAGATATTTTATTTAATTTTTAT 1126147
1126148GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTCTAATGTAGAAGCTATATTATCTATTTCACAATT 1126219
1126220GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGCTGGTGGAGGCGGTCAAACTGGCGGCGAGGGTGA 1126290
1126291GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGAGTGCTTGAAACTTCAAGCCTGTTGTTGAAACGG 1126361
1126362GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGATAATATGCTTAACAATATGTTTTCTAGCGATATT 1126433
1126434GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTTAAGCCAGATAATGAATATCAAGAGTATGTCGA 1126504
1126505GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGCAATTATGGAACGATTATGGGGATTGGTTAGATGAA 1126577
1126578GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGCTATATTGGGTTATAAAGTTCAACTTCGAGGCGTTA 1126650
1126651GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTGCTATGAGCATTGCAGGCAAAACAAATAAAAAAAA 1126723
1126724GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGCTGCTGCCGATACGGGTACAATTCAGGTTATATG 1126794
1126795GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTGCCATACGATACAGCATATATTTCTTTTTTAAT 1126865
1126866GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGACCAAAGCAACATTGCAATTGCAGATAGTGCTGG 1126936
1126937GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTTGTAGGCTGTAAAGGCTCAAAGGCTGTTATTAC 1127007
1127008GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGCCTCAACTTTAGCCTTAGGCTCAGTCTTTTTGGC 1127078
1127079GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAGTGTTACTGGTTTTGCTGAAGGTGGTTATACTGGCAA 1127151
1127152GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAG1127188
Left flanking sequence : Till position 1125862 (length bp)
TTGAATTGATATTTTGCTATATAACTATTTTAGCGGTTATATTATCTGATATACTTTACCCAGATAGAAA
CTTCTAAATATTATTCGTAAAATTAATTAA
Right flanking sequence : From position 1127188 (length bp)
AGCCAAGACAAACCTAGAGTTTGCAAGGCTTTGAGAGAATTATTTGCTGGTGTTTTTTCGCAAACATCCT
ACTTGTAAAAAAATGTAGACATTTTGCGAA
Print the CRISPR sequence : From position bp To position bp