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CRISPRs details
NC_017461_5
Flanking alignement tool
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NC_017461_5                                                                                                                 
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Strain :
Fervidicoccus fontis Kam940
RefSeq :
NC_017461 (chromosome circular)
CRISPR id :
NC_017461_5
DR consensus (24 bp) :
GAATCTGTTAGATAGAATTGAAAG
Number of repetitions :
18
Begin Position :
61768
End Position :
62836
61768
GAATCTGTTAGATAGAATTGAAAG
TGAGGATGACTACATTGTAGTGCCTCCACAGAGACAGC
61829
61830
GAATCTGTTAGATAGAATTGAAAG
TGTCAACTTCAAGCTGAATTACTTGCTGCTGATCGCT
61890
61891
GAATCTGTTAGATAGAATTGAAAG
TTTGTGCCACTTTTTGCGATCGGCGCGATTGTGCTAAAT
61953
61954
GAATCTGTTAGATAGAATTGAAAG
AAATCCGCTATTTCATCTTGCTTACTTTTGTCTTCG
62013
62014
GAATCTGTTAGATAGAATTGAAAG
GACGAGTTCGTTTCGTATATGTCAACGCTGGGGATCC
62074
62075
GAATCTGTTAGATAGAATTGAAAG
TTCTCTTAAGTTTTCTATGTCCTCTTCGATTGTTTTT
62135
62136
GAATCTGTTAGATAGAATTGAAAG
TTAGTTTCTTCTCGTATAACTCCTGCCAAAGGTAGT
62195
62196
GAATCTGTTAGATAGAATTGAAAG
GCAAGTGTGCTTTGTTGTTGTTGTTGCGGTTGCTTAGCT
62258
62259
GAATCTGTTAGATAGAATTGAAAG
GCGTTCAGTTGGCTAATAAACGTAATTGCGCCTACCAA
62320
62321
GAATCTGTTAGATAGAATTGAAAG
CTCCAATGCCTGGGGCACTAGAGTTATTATTATTAT
62380
62381
GAATCTGTTAGATAGAATTGAAAG
TAATAACGAGGCCTTCGTTCTCGAGCTGTTTCAAAT
62440
62441
GAATCTGTTAGATAGAATTGAAAG
ACTCCTAGCCCAATATCAATTAATGCAAGTTCTGTAGA
62502
62503
GAATCTGTTAGATAGAATTGAAAG
TATAACATGCATCTTATCACCTAAGCTATCATCTTCCTG
62565
62566
GAATCTGTTAGATAGAATTGAAAG
GCTTTAGATATCTCGTGTTCCTTCAGATAGTATTTAA
62626
62627
GAATCTGTTAGATAGAATTGAAAG
CTTGTTATTTTTCCTTGGCTAACGAGACTGTCTAAGT
62687
62688
GAATCTGTTAGATAGAATTGAAAG
TTAGACACGGCGAGACGCAGATAATACCCTGGACCGGA
62749
62750
GAATCTGTTAGATAGAATTGAAAG
TATCGTGCATAACGAGTTTAAAGAGTGAGTACCAATCGA
62812
62813
GAATCTGTTAGATAGAATTGAAAA
62836
Left flanking sequence : Till position 61768 (length
bp)
GAATTGATGGTCCTTTCGCGATTTTTTCGAGCGAGGGCGAAAAGCTTTTATTGATAATACGCCATTATAA
ATAATAAGAATGAACGCTACAAATAGTGCA
Right flanking sequence : From position 62836 (length
bp)
GCGATTCCGAAAAAGATATATAGTTTATAGCTAAATAGAAGTTTAGGAGAACTGCCTTGAGCGAGAAAAA
GTACCATGTAATTGTAACCGTAGGGACAAG
Print the CRISPR sequence : From position
bp To position
bp