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CRISPRs details
NC_017527_4
Flanking alignement tool
Page manual
  
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NC_017527_4                                                                                                                 
top
Strain :
Methanosaeta harundinacea 6Ac
RefSeq :
NC_017527 (chromosome circular)
CRISPR id :
NC_017527_4
DR consensus (36 bp) :
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
Number of repetitions :
40
Begin Position :
1830362
End Position :
1833302
1830362
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
AACCGTAACCAGGCTCCCCTAGAGTAGTGCTTTTCTT
1830434
1830435
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TTTTAAGCGGGTTTGGAATTCGGCGATTGGTTTTCTT
1830507
1830508
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
AGCTCCAATTCAGCGAAACGGCATCGGTGCCAACGG
1830579
1830580
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TTTGCGCTGACAAGATCTTTGTCGAAGGGTATATCGTTAA
1830655
1830656
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ATTATTTGAAGAAATCGAAAAAATTTCAGAGAAAGAA
1830728
1830729
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TATAGACGATTCCGCCTACTATGATCAACATTGTTGC
1830801
1830802
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TCATTTTCCCTAACTTCTCTACCACGATTAGGGGGTA
1830874
1830875
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
AGCCATAGCCTCCTGATGACCTTCCGGCCCCAGACCTTAT
1830950
1830951
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ACCTCCGTTCCGGTTGCAAGATGTCCATCGATGTCTTCCCCAG
1831029
1831030
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GATAGAAGAGGTAGATCGAAGCCCCCTTCATTGCTGACT
1831104
1831105
CTATCCATGGCTGAAAAGTGCGTGGCCCCATTGAAA
CTTGTCAACGGTGAACAACTGGGGGGTACCGCTGAGC
1831177
1831178
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ATCTACTGAAAATTCAAAAGATGCGTTATAGTTCA
1831248
1831249
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
CGAGAGGGCGGCTCGGCCCAAACCCGCTGAATCGGTC
1831321
1831322
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ATGGGGGCGTCCAGGTTGGCGAGGTCGCCGGGTTTCGCGGCC
1831399
1831400
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TGCGATCTCGGCACGGTATTCATCTACCTTATCTGGGAAGTTG
1831478
1831479
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GCCGCAACAAATTCCTCTGCCGCGACCAAGACGGGC
1831550
1831551
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
CATAGCGTCATCCTCCTATGGATTGCCGGAATCGTTCCGG
1831626
1831627
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TTACAAAACCGTGCCCGCGTTGGTTATACAACGCTTCTC
1831701
1831702
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
CATTATTTCGCTCCTCAATCTCTCTCGTACGATCAAC
1831774
1831775
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TCCCTAACACATGGAGATCTATCTTGCTGAACATTTCGGC
1831850
1831851
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TCAAAACAGCAAGACTATAGATGATCATAGCTGTCCTCG
1831925
1831926
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
CGGTCGACGCCGGCCGGAGGATGATCATCTCGACGGA
1831998
1831999
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ACGATCACCCAGACCTGCGAGGGAGGGCCCCGGGGAGGGACGGC
1832078
1832079
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GAAAATAATGGCTTTAGCTTCTTCTAGAACATCCT
1832149
1832150
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
AGAGTGGATATTTTGATTGCTTAGAACCAAACCGGAA
1832222
1832223
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TTATCATCCTGAACATCGTCCAGCATGACCACTATC
1832294
1832295
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GTCATCAGACGTCAGCCCCTCCTGTTTTAAGTTCTT
1832366
1832367
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ATCTCTAATCTTGAGCAAGCCCGCGCTGACGAGACCTTCA
1832442
1832443
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TGTTTCGGGCTTCCCTAAGGAGGCCGTCAGCATATTC
1832515
1832516
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GCCAACCCGACTATCTTATCCAGCATCGCTTTTTCAAGATCGC
1832594
1832595
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ATAGTAGCGTGCCCCGTGAGCGCGCAGGATAAAGTTGGTGGCG
1832673
1832674
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GTTTACCTTTGGAACCCATATCTTTTGCCAATATTCTTC
1832748
1832749
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
AGGAAGTCCAACACAAACTGAATAACCTGTGCGTCTGTGAG
1832825
1832826
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GGGCGGCCATCAGGCGCAACCCTCAACGCAGATACTTAA
1832900
1832901
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
CGCACGTATTGAAAAGAAGGTAAACAAGGAGAGAAG
1832972
1832973
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
ACAAGGGCGATGTCTTCAACCTTGCCGGGCAGATGC
1833044
1833045
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GATAAAGGCGCCACAACAATGATATCATCATAATGAC
1833117
1833118
CTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
TTGATATAGGATGCCGAAATATGACGCAGTGAGCACTA
1833191
1833192
GTATCCATGGCTGAAAAGTCGTGGCCCCATTGAAAC
GAATTGGAGCCTATCCATCCCAAATGGATACCAGGTTTG
1833266
1833267
GTATCCATGGCTGAAAAGTCGTGGCCCCATCGAGAC
1833302
Left flanking sequence : Till position 1830362 (length
bp)
TCATTCCAGGGTCAACATTCTGAATGTTTTCTATGGAGTTGATGAACCTCTCGAAAATCGCCTTTTTTTC
GATAGCAGTAAAGGCCGAAAAACGGCCGGC
Right flanking sequence : From position 1833302 (length
bp)
ATCGCCCCGGAGTGCTCTGTCTCCGGGGATTCAGCAACCGGAAAAAAGTCTGAAAAGGGAAAAGGTTATA
GTTTTTTAACGAGCTGCTCGGTGAGGGAAC
Print the CRISPR sequence : From position
bp To position
bp