Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017764_1                                                                                                                 top


Strain : Pasteurella multocida subsp. multocida str. 3480 RefSeq :NC_017764 (chromosome circular)
CRISPR id : NC_017764_1
DR consensus (29 bp) : TTTCTAAGCCATCTACACGATGGTGAACTNumber of repetitions :7
Begin Position : 1070746 End Position : 1071134

1070746TTTTTAAGCTATCTACACGATAGTGAACACTCCAGTCTTTGTGACGAACTTTGCAGATAT 1070805
1070806TTTCTAAGCCATCCACACGATGGTGAACTTCTCGACTTCTTTTGAACAGTCCACGATGAA 1070865
1070866TTTCTAAGCCATCTACACGATGGTGAACCTTCCGGCGTGACCGCTTTTTTAAAAATTAAA 1070925
1070926TTTCTAAGCCATCTACACGATGGTGAACAAGTGAACTCTTGTGACACTGGTGCGCCATTA 1070985
1070986TTTCTAAGCCATCTACACGATGGTGAACTTGGATATTGATAAAAATCAGGCGCTTTAAAC 1071045
1071046TTTCTAAGCCATCTACACGATGGTGAACTCCCGCTGTATTCGAACGCCCGCAGGTAACGA 1071105
1071106TTTCTAAGCCATCTACACGATGGTGAACT1071134
Left flanking sequence : Till position 1070746 (length bp)
GCTTAACGGCATTGGATACACCGGTCTTGAAAACCGGCGAGGGTTTACACTATCTAGTCTATAATGAACG
ATTCGAACTCGCTCTCTTCCGATTATGAGT
Right flanking sequence : From position 1071134 (length bp)
AAATGAATTTTGTTATATCTTCGGATATTTCAATTTGTTAAAGAACATCTGAAAAAAAAACCTTTTTTAG
GGTAGAACAATAACCCTTTGATCTTATTCG
Print the CRISPR sequence : From position bp To position bp