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CRISPRs details
NC_017766_1
Flanking alignement tool
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NC_017766_1                                                                                                                 
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Strain :
Streptomyces hygroscopicus subsp. jinggangensis 5008
RefSeq :
NC_017766 (plasmid pSHJG1 linea)
CRISPR id :
NC_017766_1
DR consensus (30 bp) :
GGGACCATCCCCGCACGCGCGGGGAGCACC
Number of repetitions :
6
Begin Position :
40507
End Position :
40839
40507
CGTGTGCTCCCCGCGCCCGCGGGGAGCACA
CCCACCACACCCCGAGCCGACTGGCCGGGGC
40567
40568
GGGACCATCTCCGCACGCGGGGAGCACCAC
GTGGCGGGCTCACCGGCCGCGATGACCTC
40626
40627
GGGACCATCCCCGCACGCGCGGGGAGCACA
GTGCCTCGAAGACGAGGGTGGAGGCTGCGGC
40687
40688
GGGACCATCCCCGCACGCGCGGGGAGCACC
GGGTTGCGGGGGCGTGGATGGTCGTGGTCAT
40748
40749
GGGACCATCCCCGCACGCGCGGGGAGCACC
TTCTTGGCGGCCTTGTTGATGCGCTTCTTGT
40809
40810
GGGACCATCCCCGCACGCGCGGGGAGCACA
40839
Left flanking sequence : Till position 40507 (length
bp)
GTGCTCGATGTCGGTGAAGCGGACTTCCTCCAGTTGGCCGGCGCGGCGGCCGCTGTCCTGGAAGTACACC
TCCTTGAGCCCTTCGGCGTACAGCCCGACT
Right flanking sequence : From position 40839 (length
bp)
CTCGATGGCCTGCGGGTATGGCGCTTGGAAGTCTGTGTTTCTATGACTTTCAATTATTCCGGCGTACTGC
GCATATGGGCTAACGCTTGCCGAATCGACG
Print the CRISPR sequence : From position
bp To position
bp