Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017766_8                                                                                                                 top


Strain : Streptomyces hygroscopicus subsp. jinggangensis 5008 RefSeq :NC_017766 (plasmid pSHJG1 linea)
CRISPR id : NC_017766_8
DR consensus (29 bp) : GTGCTCCCCGCGCCCGCGGGGATGGTCCCNumber of repetitions :11
Begin Position : 57048 End Position : 57688

57048GTGCTCCCCGCGCCCGCGGGGATGGTCCCGACGTGCTCACTTGGCGATCTCCTTACGGGCG 57108
57109GTGCTCCCCGCGCCCGCGGGGATGGTCCCGACGAGGTAGTCACCCTGGTCCGGATCCGTCG 57169
57170GTGCTCCCCGCGCCCGCGGGGATGGTCCCATCGAGAATCATTTCGTCGTCGACCCCGCGAA 57230
57231GTGCTCCCCGCGCCCGCGGGGATGGTCCCCCCACGAAGCCCCCGTCCGAGTCTGGGCGGGGG 57292
57293GTGCTCCCCGCGCCCGCGGGGATGGTCCCAGGTTCCCGTACTGGCGGAGCGGCAGGCCGAA 57353
57354GTGCTCCCCGCGCCCGCGGGGATGGTCCCGTCTGGCCCAACTGGTGCCAGGATCATCCCCA 57414
57415GTGCTCCCCGCGCCCGCGGGGATGGTCCCCAAGGTGTCAGCACGAGACACAGGGGAGGCCA 57475
57476GTGCTCCCCGCGCCCACGGGGATGGTCCCGGCGGCCAGTGCGTTGAGGTCGCCACCAACCT 57536
57537GTGCTCCCCGCGCCCGCGGGGATGGTCCCCGGGCCCGGTCACCTTCCAGTCCCTCTTCCAA 57597
57598GTGCTCCTCGCGCCTGCGGGGATGGTGCCGGGGCACCCTTCGCTGTCGGCAGCGTCTGGAC 57658
57659GTGTTCCCAGTGCCCGCGGGGGCCGGCGC57687
Left flanking sequence : Till position 57048 (length bp)
CGGCAGACCGTCTCCAAAGTGCGCTTCGGTTGGTATGCCGGATTCGGTGAAAGTCATGGAAGAGGAGTCG
ATGGCGCGGTAAGAATGCAGGTCAGTGAGT
Right flanking sequence : From position 57688 (length bp)
GGTCGCCGGTCCACCACATCCGCGAGGCCGAACGGCTGGCCGTGGGCCTCACAGGTGCGGCTGTCGCCGC
GTGCTCACATGGCGTTGGCGGTGACGGCAG
Print the CRISPR sequence : From position bp To position bp