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CRISPRs details
NC_017946_4
Flanking alignement tool
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NC_017946_4                                                                                                                 
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Strain :
Pyrococcus sp. ST04
RefSeq :
NC_017946 (chromosome circular)
CRISPR id :
NC_017946_4
DR consensus (30 bp) :
CTTTCAATTCTTTTTTAGTCTTATTGGAAC
Number of repetitions :
15
Begin Position :
800356
End Position :
801332
800356
CTTTCAATTCTCCTATAGTCTTATTTGGAA
CATGAGGGCCGTCGAGAAGGCCGAGAGGGCCCTGAGCG
800423
800424
CTTTCAATTCTTTTTTAGTCTTATTGGAAC
AAAAACTCGGAGTGGACATAAACACGGACAAGCTCGC
800490
800491
CTTTCAATTCTTTTTTTAGTCTTATTGGAA
CTTTACGTCTCGGACATTGACTCAGTTATGATGCAGTATT
800560
800561
CTTTCAATTCTTTTTTAGTCTTATTGGAAC
TAGCCGCTGAGGAGAAGTGGGCAAAGAGGATCATG
800625
800626
CCTTTCAATTCTTTTTAGTCTTATTGGAAC
TACAAGCCGATAGAAGGAGACAGAACCCCAGCAACCCT
800693
800694
CTTTCAATTCTTTTTTAGTCTTATTGGAAC
TAAGCTTAAATCCCTCTGGAGTTATGTCGTAAATGTA
800760
800761
CTTTCAATTCTTTTTTAGTCTTATTGGAAC
GTTGGTGCGTTGGGCTTGGTTGTTCTCGATTAGTGTG
800827
800828
CTTTCAATTCTCTTATAGTCTTATTGGAAC
TTGATGCTCCTTCTAAGCCTGTTGAGATACATAAGAA
800894
800895
CTTTCAATTCTCTTATAGTCTTATTGGAAC
TCGAATGGGTCTCTAAAAATCAGGGGGATGTTGAAATAA
800963
800964
CTTTCAATTCTCTTATAGTCTTATTGGAAC
GCCGAGGCCCCACCCGGGGGCCGGGGGAACCCCCAAG
801030
801031
CTTTCAATTCTCTTATAGTCTTATTGGAAC
AAGATCTACCTCCACAATGTCCCCATCCTTAATTCCC
801097
801098
ATTTCAATTCTCTTATAGTCTTATTGGAAC
CAAAAACATCCTTATACGGGTCGAACACTCCACCGAC
801164
801165
ATTTCAATTCTCTTATAGTCTTATTGGAAC
GCGAGATCCTAAGGGACAAGTACGGCTTTGACTTTTCGG
801233
801234
ATTTCAATTCTCTTATAGTCTTATTGGAAC
CTTATGTCAGGTACTATTCTCCTGATTATCATACTGAAT
801302
801303
ATTTCAATTCTCTTATAGTCTTATTGGAAC
801332
Left flanking sequence : Till position 800356 (length
bp)
GGGACCACCAGAATTCTATTAACATGCTATCACTTCCCTTCTCTATTATGGTCTTATTAGAATGTGCAAA
TGAATGAGAATATATTGAACATAAACATAC
Right flanking sequence : From position 801332 (length
bp)
AGGAGGCTTTTTTGGTGTTTTTTGTTTTCATACTGTTCTTCTGCCTTAATTTTTATAAGATTTTTGGTGG
AGGGATTATTTCCGAGGGATTTGGAGTCTT
Print the CRISPR sequence : From position
bp To position
bp