Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_017946_4                                                                                                                 top


Strain : Pyrococcus sp. ST04 RefSeq :NC_017946 (chromosome circular)
CRISPR id : NC_017946_4
DR consensus (30 bp) : CTTTCAATTCTTTTTTAGTCTTATTGGAACNumber of repetitions :15
Begin Position : 800356 End Position : 801332

800356CTTTCAATTCTCCTATAGTCTTATTTGGAACATGAGGGCCGTCGAGAAGGCCGAGAGGGCCCTGAGCG 800423
800424CTTTCAATTCTTTTTTAGTCTTATTGGAACAAAAACTCGGAGTGGACATAAACACGGACAAGCTCGC 800490
800491CTTTCAATTCTTTTTTTAGTCTTATTGGAACTTTACGTCTCGGACATTGACTCAGTTATGATGCAGTATT 800560
800561CTTTCAATTCTTTTTTAGTCTTATTGGAACTAGCCGCTGAGGAGAAGTGGGCAAAGAGGATCATG 800625
800626CCTTTCAATTCTTTTTAGTCTTATTGGAACTACAAGCCGATAGAAGGAGACAGAACCCCAGCAACCCT 800693
800694CTTTCAATTCTTTTTTAGTCTTATTGGAACTAAGCTTAAATCCCTCTGGAGTTATGTCGTAAATGTA 800760
800761CTTTCAATTCTTTTTTAGTCTTATTGGAACGTTGGTGCGTTGGGCTTGGTTGTTCTCGATTAGTGTG 800827
800828CTTTCAATTCTCTTATAGTCTTATTGGAACTTGATGCTCCTTCTAAGCCTGTTGAGATACATAAGAA 800894
800895CTTTCAATTCTCTTATAGTCTTATTGGAACTCGAATGGGTCTCTAAAAATCAGGGGGATGTTGAAATAA 800963
800964CTTTCAATTCTCTTATAGTCTTATTGGAACGCCGAGGCCCCACCCGGGGGCCGGGGGAACCCCCAAG 801030
801031CTTTCAATTCTCTTATAGTCTTATTGGAACAAGATCTACCTCCACAATGTCCCCATCCTTAATTCCC 801097
801098ATTTCAATTCTCTTATAGTCTTATTGGAACCAAAAACATCCTTATACGGGTCGAACACTCCACCGAC 801164
801165ATTTCAATTCTCTTATAGTCTTATTGGAACGCGAGATCCTAAGGGACAAGTACGGCTTTGACTTTTCGG 801233
801234ATTTCAATTCTCTTATAGTCTTATTGGAACCTTATGTCAGGTACTATTCTCCTGATTATCATACTGAAT 801302
801303ATTTCAATTCTCTTATAGTCTTATTGGAAC801332
Left flanking sequence : Till position 800356 (length bp)
GGGACCACCAGAATTCTATTAACATGCTATCACTTCCCTTCTCTATTATGGTCTTATTAGAATGTGCAAA
TGAATGAGAATATATTGAACATAAACATAC
Right flanking sequence : From position 801332 (length bp)
AGGAGGCTTTTTTGGTGTTTTTTGTTTTCATACTGTTCTTCTGCCTTAATTTTTATAAGATTTTTGGTGG
AGGGATTATTTCCGAGGGATTTGGAGTCTT

Print the CRISPR sequence : From position bp To position bp