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CRISPRs details
NC_017946_5
Flanking alignement tool
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NC_017946_5                                                                                                                 
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Strain :
Pyrococcus sp. ST04
RefSeq :
NC_017946 (chromosome circular)
CRISPR id :
NC_017946_5
DR consensus (29 bp) :
CTTTCCATACTATTTAGTTCTTCGGAAAC
Number of repetitions :
15
Begin Position :
987180
End Position :
988184
987180
TTCTCAATACTACTAAGTTCTTCGGAAAC
GCACAACTGAGGCCGTGCATTTCTTCACCTACAACAACACCAG
987251
987252
CTTTCCATACTATTTAGTTCTTCGGAAAC
GGAGGGCTAACAATACTAAAATATGAGACGGATGAGGAAGTTGAGCT
987327
987328
CTTTCCATACTACTAAGTTCTTCGGAAAC
TTGGTTGGAGGGAGCTTAGTAGGGCGTTTGTTGAGGG
987393
987394
CTTTCCATACTACTAAGTTCTTCGGAAAC
CAAAACTACCCCTTACAAGCAAAGGTGGTGGTTGTG
987458
987459
CTTTCCATACTATTTAGTTCTTCGGAAAC
TTCAGAATACTGTAAGAGGGACACCGAGATTGTCCTAAGGTTCGT
987532
987533
CTTTCCATACTATTTAGTTCTTCGGAAAC
CCTTTCTTTGGGGGTGTTGTTGTGCAGGTGATTTTTCC
987599
987600
CTTTCCATACTATTTAGTTCTTCGGAAAC
AAGTGATGACACCGGACGTTGAGCCACCCAACAACTT
987665
987666
CTTTCCATACTATTTAGTTCTTCGGAAAC
TTGATGAGCTGGGGCCGGTAGGGGCCCCAGACAGCA
987730
987731
CTTTCCATACTATTTAGTTCTTCGGAAAC
AAGTTCTAGGTATGAAAGAGATTGCCTTGTCTGTTTGTCTGTTT
987803
987804
CTTTCCATACTATTTAGTTCTTCGGAAAC
AAGGCCAGGGAGGTCGGGAAGCGCTTGATCGGCGGT
987868
987869
CTTTCCATACTATTTAGTTCTTCGGAAAC
ATGAGTTATATGAAGAGTTTAATGATTACATTCAAAAGCAAAT
987940
987941
CTTTCCATACTATTTAGTTCTTCGGAAAC
TCTTCACTTCAACCCCAGAATACCTAACAAGGTCAG
988005
988006
CTTTCCATACTATTTAGTTCTTCGGAAAC
CTAAATAGTATGGAAAGCACCAGGAGGCGGTAAACTCATAATCACTCGGCAACC
988088
988089
CTTTCCATACTATTTAGTTCTTCGGAAAC
TGTAACCACATAGAATAGTAAAGTGAGCCTGGGCGTAA
988155
988156
CTTTCCATACTATTTAGTTCTTCGGAAAC
988184
Left flanking sequence : Till position 987180 (length
bp)
TCTGGATTCTTACCGAGGATTACGGCATACTTCTCCATACAAGATTGGGGCTGAAAGGTAAATATAAGAA
TTTTTCCTTCCCTTTGTTAGTTCTTTGCTC
Right flanking sequence : From position 988184 (length
bp)
TTTGGGTTTTTTGGTTGTTTTCCTTCATTACTCCCTCCCCCAGGCTTAAATAATTTACCCCTTCAGGAAA
CCCGTGCTACTGCACTCTCTTTATAAACCC
Print the CRISPR sequence : From position
bp To position
bp