Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018524_14                                                                                                                 top


Strain : Nocardiopsis alba ATCC BAA-2165 RefSeq :NC_018524 (chromosome circular)
CRISPR id : NC_018524_14
DR consensus (29 bp) : CTGCTCCCCGCGCACGCGGGGATGACCCCNumber of repetitions :8
Begin Position : 2268230 End Position : 2268687

2268230GTGAACCCCACGCACGTGGGGATGGACCGGATGGGAGTACCTCCTCCAGGGACGCGCCTGGC 2268291
2268292GTGAACCCCACGCACGTGGGGATGGACCCCCGATTCGCCGCCGTGGCCGCCACACTCACCG 2268352
2268353GTGAACCCCACGCACGTGGGGATGGACCGGCGCACCCGGACCTCACCAAGGAGTTCACCCG 2268413
2268414GTGAACCCCACGCACGTGGGGATGGACCGGACTATGGTCCCATTCAGGCCGCTCGGGCCAC 2268474
2268475GTGAACCCCACGCACGTGGGGATGGACCGAGGTCTCTTCATTCAACGTTCGCGTAGTGCCC 2268535
2268536GTGAACCCCACGCACGTGGGGATGGACCGAACACCGGTCTCGCGACCGGAGACGAGGTCAT 2268596
2268597CTGCACCCCACGCACGTGGGGATGGACCGGTCGAGACGGTCCGGCACGAGGTCGAACACAA 2268657
2268658CTGAGCCCCACGTATGTGGGGATGGGCCG2268686
Left flanking sequence : Till position 2268230 (length bp)
GGTTCTGTGGGGCTGTGGTAGGGATGGGTGAGGAGCGGAGGCCGCTTCGTGGTGAAGGTTGCGGGAAGAT
AACGTCTCGCATCGTCCCAGGTCATTAAGT
Right flanking sequence : From position 2268687 (length bp)
GGCATGGGGGCACCCGGTTCTCGTTCGGTGCAGGGGTGACCGGGTTCGGCCAGTTGTCCGTACACGGCCT
GTGGCCGGCTACGGTCGCACCATGGCCAAA
Print the CRISPR sequence : From position bp To position bp