Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018608_2                                                                                                                 top


Strain : Staphylococcus aureus 08BA02176 RefSeq :NC_018608 (chromosome circular)
CRISPR id : NC_018608_2
DR consensus (38 bp) : ATTCGATAACTACCCCCGTAGAAGAGGGGACGAGAACTNumber of repetitions :3
Begin Position : 65342 End Position : 65525

65342AATTCGATAACTACCCCGTAGAAGAGGGGACGAGAACTCTTCTAAGACGCGATATGATTCTAATTGGTCTTC 65413
65414ATTCGATAACTACCCCCGTAGAAGAGGGGACGAGAACTGATATACTCCTTTACCATGTATTAATTCTGGACCAC 65487
65488TATTCGATAACTACCCCGTAGAAGAGGGGACGAGAACT65525
Left flanking sequence : Till position 65342 (length bp)
TGTGACATTCTGCACTTATAGTACAAGTGATTTGTCACTATTTTTGACAGTAAATTTTGCCTTTGAACTA
TTGATTTGATAGGCTTTAAAGAGCTATCTA
Right flanking sequence : From position 65525 (length bp)
CATATTCGATCGTGTATATCAAAACTTTATGCATTCGATAACTACCCCGTAGAAGAGGGGACGAGGATCT
CATCTTGATGATCCCAATTGGCTTGGTTAA
Print the CRISPR sequence : From position bp To position bp