Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018870_8                                                                                                                 top


Strain : Thermacetogenium phaeum DSM 12270 RefSeq :NC_018870 (chromosome circular)
CRISPR id : NC_018870_8
DR consensus (30 bp) : GTTTCAATTCCTCATAGGTACGCTGAAAACNumber of repetitions :21
Begin Position : 2449704 End Position : 2451060

2449704GCTAATTTTCAGGGCAGGTACGCTGAAAACTAAAACTCGTATTCCTTCCCAGTCTTTTTCTTTGGGCA 2449771
2449772GTTTCAATTCCTCATAGGTACGCTGAAAACACGGAACCACTCCTGCCAATATGCTTCTTTTTCGTTTC 2449839
2449840GTTTCAATTCCTCATAGGTACGCTGAAAACAGAGCAAAGCAATATCCGGGGGCGTCACATGCTTACA 2449906
2449907GTTTCAATTCCTCATAGGTACGCTGAAAACCCCGCTTTCGGAGCTACCGGACGAACCGGCGGGATTC 2449973
2449974GTTTCAATTCCTCATAGGTACGCTGAAAACCCGAAACTGTATAGGAGAGAAGTGCGGGTGTTTCGA 2450039
2450040GTTTCAATTCCTCATAGGTACGCTGAAAACTCCGGGAAAGAAACGAAGTAATTACTCCCCTTACC 2450104
2450105GTTTCAATTCCTCATAGGTACGCTGAAAACGAGGAAGCTACCGTTTCGTGTCGTATTATGATTTATTG 2450172
2450173GTTTCAATTCCTCATAGGTACGCTGAAAACGCATGCCCCGGTAAGTATTATCCGCTGCAGGAGAT 2450237
2450238GTTTCAATTCCTCATAGGTACGCTGAAAACAAAAAGGGAGGAATGCGAAATGAGGAAGAACGTCGC 2450303
2450304GTTTCAATTCCTCATAGGTACGCTGAAAACGACAAGCACACATTCTTTGCTGTTCTTGAAGAGATG 2450369
2450370GTTTCAATTCCTCATAGGTACGCTGAAAACAACCAGATTTGGAAGAGGGTGTTGTCCTATCAAAG 2450434
2450435GTTTCAATTCCTCATAGGTACGCTGAAAACTCCCCGGCCGGCCGGTGCCTGCCGCAAGGATGACG 2450499
2450500GTTTCAATTCCTCATAGGTACGCTGAAAACTGGAACGACGCAGGCCCGTACTGGCGGATTTCGTA 2450564
2450565GTTTCAATTCCTCATAGGTACGCTGAAAACAGGAGAATTTTCCTTTGTTTCCCTTGCCCCTGTTCT 2450630
2450631GTTTCAATTCCTCATAGGTACGCTGAAAACTGGACTACCAAATTTAAATAAGCCATTGCGAGAGAGCA 2450698
2450699GTTTCAATTCCTCATAGGTACGCTGAAAACAAGAAAGCTCTTGCTACGTTGCATGGAGGCGTTTC 2450763
2450764GTTTCAATTCCTCATAGGTACGCTGAAAACCTCACTGCGGCGCGATCCGGCGTTATGAGCGGAGGA 2450829
2450830GTTTCAATTCCTCATAGGTACGCTGAAAACCTTCCTAATGAACCATCCCAATAAACTCACCGTCAAG 2450896
2450897GTTTCAATTCCTCATAGGTACGCTGAAAACGGAGAGTTTGCTGCTGATATATCGATTGATCTTCAT 2450962
2450963GTTTCAATTCCTCATAGGTACGCTGAAAACCCCGGACAATACCCTCATGATACCGTCCTCGGTTCTTC 2451030
2451031GTTTCAATTCCTCATAGGTACGCTGAAAAC2451060
Left flanking sequence : Till position 2449704 (length bp)
GCATCGAGGTTGCATAATCGAGCTCTTAGTTTTATTCGTTTTTAAGTCTCATTATCCCTTTAATGCCTAG
GGTCTGCTTGATTATTGCCTTTTTTGTGAA
Right flanking sequence : From position 2451060 (length bp)
ATCGCCTCCTTAGATTGAATCCTCTCGTCGTAAGCGTAAAATAACCCCCACCTTGTGTTTGAGGTGGGGG
CTTAAGCATTCCAATTAATTCACCGGCAGG
Print the CRISPR sequence : From position bp To position bp