Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019701_1                                                                                                                 top


Strain : Pseudanabaena sp. PCC 7367 RefSeq :NC_019701 (chromosome circular)
CRISPR id : NC_019701_1
DR consensus (37 bp) : ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACNumber of repetitions :10
Begin Position : 841798 End Position : 842500

841798ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACAGTATCGGCCACCAGGCATACCTGATAACAGGTGCTCCG 841873
841874ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACCGATCCCATTTTCTGGGACCGTGCCCAGTGGTGCGCCGTA 841950
841951ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACTGGCAGTGACCCAGCCATCCGTGTCGGTGCTGTCGAT 842024
842025ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACACACCATTTGACCCAGCCTCAAAACTAGGACGATGGG 842098
842099ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACTTTAGTATAGGTCACGTTTACCGGACATGTCAAGC 842170
842171ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACTTTGGTTTTAGTGGTCATTTTTTGTTTAGGCTCTTG 842243
842244ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACCAGCACAGTCTTTGGTGGGATGCTGTTTTCATTGGCG 842317
842318ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACTATTTAAATCAGTATATTTATCTAAGTAAATCAAC 842389
842390ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAACCTAACAAATTCCGCCATGTGCTTTTTGTCTATACCAA 842463
842464ATTGCAACGCTCCTTTACCCCGCAAGGGGACTGAAAC842500
Left flanking sequence : Till position 841798 (length bp)
TTTGGACTTTTCTGGTGTTGGGCTTTTGTACTAACATTTAAGCAAGTCCGCGCAGGTTGGGGCTAGAAGT
CAGTCTAGGTCTTGGTTTCAGATACCTGCT
Right flanking sequence : From position 842500 (length bp)
AAAATAGCTATACTTAACACAGCGCCCCAACCATCAGGAGAGCCAAGATGTTAAGCAAAAATTCAAAATA
CTTGATCCTGCCCATAGCGGCATTAATCAG
Print the CRISPR sequence : From position bp To position bp