Institut de Génétique et Microbiologie

CRISPR details


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NC_019703_3                                                                                                                 top


Strain : Geitlerinema sp. PCC 7407 RefSeq :NC_019703 (chromosome circular)
CRISPR id : NC_019703_3
DR consensus (37 bp) : TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACNumber of repetitions :24
Begin Position : 2281100 End Position : 2282806

2281100CGTCTAAAGGGGCCGCATTTTGAGATTGCGGTGAGACTTGAACGTTACGGTCTGGGAGGTATCGCCGCCAGTAGC 2281174
2281175GCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACCGCTGGCGTTCCAGTCAAAGTTTTTGAGTTGCTC 2281245
2281246GCTTCAAAGGGGCCGCATCTTGAGAGTGCGGTGAGAGACGCAAAAGTGGGCGAGGTGATCGTTGCCGAGGGGCA 2281319
2281320GCTTCAAAGGGGCCGCATTTTGAGATTGCGGTGAGACTCCAAGCATTTTTTGCTGTCCGAAAGCACTCTCTCG 2281392
2281393GCTTCAAAGGGGCCGCATTTTGAGATTGCGGTGAGACGGTAGCTTTGAAAGATGCCCTTGATCTGATCCTT 2281463
2281464GCTTCAAAGGGGCCGCATTTTGAGATTGCGGTGAGACCCTAGGGTGTAGGTGGCATAGTCCACCGTGTTGAT 2281535
2281536GCTTCAAAGGGGCCGCATTTTGAGATTGCGGTGAGACGGTTGGGGCTCCGCAGCTGCGGCTTCGGGTGCCAC 2281607
2281608GCTTCAAAGGGGCCGCATCTTGAAAATGAGGTGAGACATCGGAGCTGCTAATGAAGACGGCGAAGGTGCCATG 2281680
2281681GCTTCAAAGGGGCCGCATCTTGAGATTGCGGTGAGACAGCATTTTAGGGTGCCATTAGCCAGTTTGGCCGCT 2281752
2281753GCTTCAAAGGGGCCGCATCTTGAGATTGCGGTGAGACAATGATCCGCTCTTCGGGGATCTCCCGATTTGGGAT 2281825
2281826GCTTCAAAGGGGCCGCATCTTGAGATTGCGGTGAGACAGCTTGAATATGGGATCTGGAGCAAATGGCTAGAA 2281897
2281898GCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACCTCATAAGAGGGGAGGAAGGAGTTGAGGACCGT 2281967
2281968GCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACTGCTGGCTGCTCGGCTCGACGCACCAAGGTTGGTGCCCC 2282043
2282044TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACGCAATCAATCGCGTCAGCGGGCGATCGATTTGATT 2282115
2282116TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACCCTTCCAGTTGCCGTCCAAAAGTCGTGCACGCTC 2282186
2282187TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACAAGCCGTCGGGCGGCCTGAGCCGTCGTCCTCGAA 2282257
2282258TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACCTCAGCGCTCAGCTTCACGGCACCACCCACTCATC 2282329
2282330TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACGCCCAAGTCCGATAGACCCCAATCTATATCAAGTG 2282401
2282402TCTTCAAAGGGGCCGCATCTTGAGAATGCAGTGAGACGTGGTCGAAATCGGCTCCCTGCGCCGTCTCCAGG 2282472
2282473TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACAACGGTTGCTGTGTTCCCGCTCGCAAAGCGGTCTGCTCC 2282548
2282549TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACCGCATAGCCGATGTCGTTGTCATCGTCGTACTGG 2282619
2282620TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACGTGCTGATTTTAGGCCTAATTTTAGGCAAGTCTGT 2282691
2282692TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGACCTACCAGGGTTCTTCCCTCTACCTGCACTGATGGCTATCCG 2282769
2282770TCTTCAAAGGGGCCGCATCTTGAGAATGCGGTGAGAC2282806
Left flanking sequence : Till position 2281100 (length bp)
CCCAGGGGCCTCTCCAGTCGATCTGGGATCTCCTCTATGCAGGCGCTTTTGATCTATGGACAATCCGACA
TCTCCAGGATCAGGTCAGTCTATAGGCTGG
Right flanking sequence : From position 2282806 (length bp)
AGCGAGCGGCTGAAAAGCAGAGAGGATTTAGTTTTCAAGGTTCTGATGCGCGAATCGGTCTCAAAAAGAG
CGATCGAGCAGACTGGTGGGCCTAGCATAG

Print the CRISPR sequence : From position bp To position bp