Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019729_11                                                                                                                 top


Strain : Oscillatoria nigro-viridis PCC 7112 RefSeq :NC_019729 (chromosome circular)
CRISPR id : NC_019729_11
DR consensus (37 bp) : GCCGCAATTAACCTAACTCCCTATCAGGGATTGAAACNumber of repetitions :2
Begin Position : 1286929 End Position : 1287037

1286929CTGAGAAAGGCTATAACTCCCTATCAGGGATTGAAACCCCTTGTACAACCTTTTGCACGAAGAAAATTATTA 1287000
1287001GCCGCAATTAACCTAACTCCCTATCAGCGTGGGAGTT1287037
Left flanking sequence : Till position 1286929 (length bp)
CGGAAAAATGAGGTATTCACGAATTAATTAACAATTCCCCAATCCCCCAATCTAAAATCTAAAATCTAAA
ATCTAAAATCTAAACTTGTACCTGATCTAT
Right flanking sequence : From position 1287037 (length bp)
CCAGCGTTTGACGTTTCGGGGTCGCACATCGACGAGCCGAACCTCTACTTGAATCTAACTTAGTCTTAAC
TTAAACTTAACCTAATTCCCTAGTAAATCT
Print the CRISPR sequence : From position bp To position bp