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CRISPRs details
NC_019757_35
Flanking alignement tool
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NC_019757_35                                                                                                                 
top
Strain :
Cylindrospermum stagnale PCC 7417
RefSeq :
NC_019757 (chromosome circular)
CRISPR id :
NC_019757_35
DR consensus (37 bp) :
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
Number of repetitions :
29
Begin Position :
5966534
End Position :
5968600
5966534
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GGTAACCGAGAAACCAGCTTTCTTTAATTTAGCTT
5966605
5966606
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GAAAAATCCAGCAAAGCCAAGCATGGAGACTGGA
5966676
5966677
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TGATGTAATTAGCCATTTAGTTAACAATATGCCTG
5966748
5966749
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TGTATCTCAATAAAGCTTCCCGCCAACCAAACCA
5966819
5966820
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
CAATCAGCATCAATTATGAGACTGATGAAGACGA
5966890
5966891
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
AATGGTAACAGTGCTATTGATAACCGCTTAAACCG
5966962
5966963
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TCTAGGCGTAAGTGACAAACAACGGGATTTTATC
5967033
5967034
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TTAGGATTCCCAGGATCTGCTTCGATTATAAGATT
5967105
5967106
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GCAACGCGCCTAGCGATGCGGCAGACTGCATTGTTCTTT
5967181
5967182
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GTGGCAATTGGAGAGATACAACGGATTTGGGCATCGC
5967255
5967256
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TTTGCAGTATTCTTCAATGACAACCCTAACTT
5967324
5967325
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
CACAGACTTGTTCTATGCCAACAAGAAAGCAGATAT
5967397
5967398
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GTGGCTAAGAACAACCCTAGCAAGTTAGGTGAGCC
5967469
5967470
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TTAAACTCTACTCTTCCAGCCTATGAAAATGATTTA
5967542
5967543
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
CTGAATAAATAACAACTAAGGAGACATCCCAATGG
5967614
5967615
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TCTTCATTTAAAGTAGCAAGATTATTTTTGATGCAATC
5967689
5967690
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TCAGAATTATTTTCAGCCCAGCTAGTAAAAACTG
5967760
5967761
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
CTTGCAGTTAAACGCGACTACAGCGCCTGGGGGAA
5967832
5967833
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
CTCTTACTCTAGCAGACCTAGACATTACAGAAGGAGAAGG
5967909
5967910
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GCGTATGAAATTGCTAGATCACTGGACGAAGCAGAAAGT
5967985
5967986
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TTGCCAGTGGAGCCAAGGCAGCAGACACAG
5968052
5968053
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TATGACGTACCCGTGGAGGTTGATTTACAAATGTGCGA
5968127
5968128
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
CTTTCCATAGAAGCGCGATCGCCATCTGCAAACCC
5968199
5968200
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GCAACTGATTTTTTGATAGTGCTAAAAGTTCTTTTCAAG
5968275
5968276
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TAGACGAAACCCAGGATATAAAAAGGATTGTGTG
5968346
5968347
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
ATCGGAAGCGGGTAACTCGTAACATTTCGCAAGAAG
5968419
5968420
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
GACTTAATCCCCGAAAGCACCTTTGACCAATTT
5968489
5968490
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
TCAGCGGGAAGTATCGCTACTGGCTGACCTTGCATCA
5968563
5968564
GTTGCAATTCATCTAAATCCCTATTAGGGATTGAAAC
5968600
Left flanking sequence : Till position 5966534 (length
bp)
CTCCCTCTTTTCAAATCGATGGCTGGAATGGTATATTGATGATCGATCCGCGCAACTGCACCTTGAAAAC
TAAATATGGTAAGGCTTCCAGACCCCAGCG
Right flanking sequence : From position 5968600 (length
bp)
TCAAAATTCAGTAAGTATAGCAATCCTATTTGATTTGCTTTCCAGAGAGAGGCTCAGATCCCCGACTTCT
TGAAGAAGTCGGGGATCTTTTTGTTCGTAA
Print the CRISPR sequence : From position
bp To position
bp