Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019772_3                                                                                                                 top


Strain : Anabaena cylindrica PCC 7122 RefSeq :NC_019772 (plasmid pANACY.01 ci)
CRISPR id : NC_019772_3
DR consensus (37 bp) : GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACNumber of repetitions :48
Begin Position : 57672 End Position : 61179

57672GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAATCAAATTCAGCTACGTACTTCGCGAAGCTTTCTAA 57745
57746GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTCTTATCGTCTTGTTCTGCGGTTAGACCGATGCT 57816
57817GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGCTACAATCACACAGAAAAAATTTTTATTGACCTAA 57889
57890GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACATTAGATCAGAATATTCATCTGTGGCAGATGAGCCAA 57963
57964GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGTTTCACCACTGCTACCAGACCAACTACCTTTTTTCTTG 58039
58040GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAAGCGTAAATATTTCCCGTATGAATTGGGGTAGGGTTTC 58115
58116GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAAGACAATGCAGGAATTAAAAGGATACACACCAACA 58188
58189GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGCTTTGTCTATAGTTTATAAGGGTTAGAGTGATCCAAA 58263
58264GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAATTCTTCTTGTTTCTGGATGTTATAGAATTTAGAT 58336
58337GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACCTCTTTTTATCAATCTTCCTCTGTAATCTTTTGAT 58408
58409GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGTTCTGGAGGAGGAGGATCAGGGGGTGATGCGAGT 58480
58481GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTCAACGCATATGGCGCGCAAGGTACAAGTTTCTGGACGA 58556
58557GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTTCAGTTGGAATACAACAATAGGCGAAGTCCAGCTTTA 58631
58632GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTATCTTACTATAGATACGACTATAGATAGTGATATAGGGG 58708
58709GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTCAATCAAGTACAATGGTGGCAATATCTCTTAAAT 58780
58781GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACACCCTCGCTGTCTGGCAATTCTACTAGATGAGCTAT 58853
58854GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTAGTCAGGTAGCTGCTGATTACCGTTTTGTGCGTA 58925
58926GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACATCCTACTAACCGATGGCGAAGATCTCAACATAA 58996
58997GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGTTAAATCTCTGATTCCAAGCTCTCTGTTATTCGCTGCTATA 59075
59076GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTAATATCTGGGGGATTGAGTGCGATCGCCAAATAGCAG 59150
59151GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAGGAATTTAACTCATTTTGTAGGTTAGTTTCTTCA 59222
59223GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTCTTCCAAAAATCAAAAGATATTCTTGCTGACAAGCAATCAAT 59302
59303GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTACACTAAAAAAATAATCCCCCAAACCGTCGTAACCGG 59377
59378GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGAGAAAATGACAGAAGAACAAGCAAAAGAACTTTTAAT 59452
59453GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTTGGCGTAAATGTAGCCTATTAAATCCCCCTCAAGC 59525
59526GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAACAATGGTTCGGGTTTCTCTATGTCTTGACCCTTGCC 59600
59601GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACATATCGTTATATAGTAATACGCGAGGATAGCGATATA 59674
59675GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGCCAATTTCAGAAAGATTGCCAACAAATGATTTAAGAA 59749
59750GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTTAAAATCAGCCATGATCTTTAATAATTAAATTTA 59821
59822GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACATTTCTTCCAGGGTTGGTTTATGGTGGAAAACCCTG 59894
59895GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACCAGAGAATCCAAACATCTTTAGAATCACCGCCAACC 59967
59968GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAAAAGCTTGTTGTTTGTCAAGATGAATGTCGCAGAAA 60041
60042GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTAAATGTACTATGCTGCTCTGGCATTTAAAATA 60111
60112GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTTAAGAATATGACTAATTATTGCAATACAGGTGA 60182
60183GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACCAACTATCGAAGCGGTTTCTTTCTGCTAAGTCCAATG 60256
60257GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACCAAACAGCCATAGACAACACTATTGCCACCGTTGGCG 60330
60331GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACGAGATACAAAGCAATCTGAGAAGTCTTTGCCACCTATA 60405
60406GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTAATAAGCTTCCTTTATCGATCTAAAAGCTTCAGTA 60478
60479GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTAACATAAACCCATAACCCTTGTCAAGCATGACTT 60550
60551GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTTCTTGCCATATCTGCAATAGCATTAGCAATCAAGA 60623
60624GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACACAATACTCGCAGACTTAGAAGATTTTTCAAGCCTAGCG 60699
60700GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAAAAGTTAGTTGCTAAAGAAGTTGGTGCGGCTGTCGG 60773
60774GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACATGCTATCCTATTAATTGCCTTATCAAAATAGTAGTGATTG 60851
60852GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAATGTAAAATAGACAACATGAATCCATCATTGTAG 60923
60924GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACATTATCTATCTAATTGATTATGTTGTATGTAACTA 60995
60996GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACTCAATCAAGTCCCAACATAAAGGCACTAGTTATCAAAA 61070
61071GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAACAATCCAATTAAGAACAGAAATAAATAACTCATCTT 61142
61143GTTTCGATATAACTAATCCCCGCAAGGGGACTGAAAC61179
Left flanking sequence : Till position 57672 (length bp)
TTCAGTTGGCAGTTAACCCAAAGCCGGAAATGAGGTTTTTTGAGAGGTCTGCCAAAATCCCCCCTACAGT
CTGCTCCTAGACTGTGTTTCAGATGGCGGG
Right flanking sequence : From position 61179 (length bp)
GGCTTTCACTATTGCCAAAGGAGTTTGCCATGTTTAGCAAAAGGTCTTACCAGAAGCAGTGATGACCAGT
GTGAATCACAATTACCTAAATCAAAATTAC
Print the CRISPR sequence : From position bp To position bp