Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019776_5                                                                                                                 top


Strain : Cyanobacterium aponinum PCC 10605 RefSeq :NC_019776 (chromosome circular)
CRISPR id : NC_019776_5
DR consensus (37 bp) : GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACNumber of repetitions :18
Begin Position : 1149597 End Position : 1150977

1149597GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACCCCCCAGGACGTACTAAAAGTCTTCCAAGAGGAGAGTAC 1149672
1149673GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACAACGGAAGCTAAAGAACTATTGGCTGAAAGACGAGAAGAAGAAAA 1149754
1149755GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACTAGTGATGAGCAATTAGCTCGTTTAGGTGAAAGAGTGGTAGTT 1149834
1149835GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGATAGAATAGATTTAACAATAGTTCTTCATAGCAATTGT 1149910
1149911GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACCTTAGATGAGAGTAGTATTGCCGCACTGGATGAGTATATAAATCAATGGCA 1149998
1149999GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGATGGTTGGGTGCAAGGAGATGAGATTATATACCCTA 1150072
1150073GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGCTGAACTAACAACGTCTCCTTTTTTTACTCGCCGTCCATC 1150150
1150151GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACCAAATAGAAGCGTTTAGAAATCAGTTAAAAGGGATGAAA 1150226
1150227GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGACGAATACTATAACTCCGATACGTCCGACATTGGTGTAATGGAG 1150308
1150309GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACAGCTGGCCTTTGCCCTCAGGGTATAGCGGTTACACTGACGCTA 1150388
1150389GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGAAATAAAAGAGGAGGGTACTAAAATCCCTATGACTAA 1150463
1150464GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACCCCAAGGCTGCTCAGGGGCAGGTAGTACAGGTGCTCAT 1150538
1150539GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGGTAAATAAAGCACATTTCGGAATAATCCCATTATTATGA 1150615
1150616GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGAGATCAAATTAATGTATATGTTAGAGACAGTTTAACTTTCTTG 1150696
1150697GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACGATTTATCTGCTAGGTCTGTTCTTTCGTGAACCTTGGCTAAAT 1150776
1150777GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACTTTCGTGCAGGCTAATCACCTCCACGTTACCCTAGCATTTGGGGTAACAC 1150863
1150864GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAACAGTAAAAGAATTACAAGAAGAACTAGGACAAGTAAACAAA 1150940
1150941GTTTCCGTCCCCTTACGGGGTAAATGAGGAAATTAAC1150977
Left flanking sequence : Till position 1149597 (length bp)
ATCGATTTTAAAATTTTCTTTTTTAGTATTAATACACTAATCTGAAATTTCAGTTATATCTTATTTAACA
TCTTCAACATCGGTAGAACTTATCAAAAGC
Right flanking sequence : From position 1150977 (length bp)
CCTACCTTTGGAAACCTTTACTACATCTTGCTTGTACAAAATGTATGCGAGAAACTACAGAATAACGCTT
AACATTTCTTAACACTATTTTTTTGTCAAG
Print the CRISPR sequence : From position bp To position bp