Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019892_13                                                                                                                 top


Strain : Singulisphaera acidiphila DSM 18658 RefSeq :NC_019892 (chromosome circular)
CRISPR id : NC_019892_13
DR consensus (36 bp) : GCTTCAATGGGGCCACGGCTCGGAAGCCGTGGAAGANumber of repetitions :4
Begin Position : 5269404 End Position : 5269645

5269404GCTTCAATGGGGCCACGACTCGGAAGCCGGGGCAGACTACTCGCGATGTTTGTCCAGTCGCCACTGAATGG 5269474
5269475GCTTCAATGGGGCCACGGCTCGGAAGCCGTGGAAGACAAGGTATTGCGAGCCGTGCTTTCACACTGACGCC 5269545
5269546GCTTCAATGGGGCCACGGCTCGGAAGCCGTGGAAGATATTCTCACGACTGCTCAGGTTCCTCAG 5269609
5269610ACTTCAATGGGGCCACGGCTCGGAAGCCGTGGAAGA5269645
Left flanking sequence : Till position 5269404 (length bp)
CCAGGAGCGCCGGCTTCACAGCTTCAGGCAGCTCGCTGTAAGTCTCGCCGATTTTTTCGGTCAACATGGC
ATCGCCTCGATGAAAGAGTCTCATTCATCG
Right flanking sequence : From position 5269645 (length bp)
CAGCTCCTTCGATGTCGGCAAGTTGCGCCTCAACGGGAGTCGGCCTGCAAATAGAGTCGTTTTCGCCGTC
GCATCGTGATTTTGTCTCCCATGGGAGTGG
Print the CRISPR sequence : From position bp To position bp