Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019902_5                                                                                                                 top


Strain : Thioalkalivibrio nitratireducens DSM 14787 RefSeq :NC_019902 (chromosome circular)
CRISPR id : NC_019902_5
DR consensus (37 bp) : GTCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACNumber of repetitions :16
Begin Position : 1466441 End Position : 1467533

1466441TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGCCGCCGCCGCTCTTGATGCCGCGCATGTACTG 1466510
1466511TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACTTGGTTCAGTATGTCGAGGTATCGCATGTCGTTC 1466580
1466581TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACCCCCGGATCGTCCGGGCGAGCAGTAGCTGGGTGTG 1466651
1466652TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGAATCGGTGCTCCGCACTTTTCGCACTCGCCGC 1466721
1466722TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGTGTGGGTAGTTAGTCATGCTGCTTCTCCTTC 1466790
1466791TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGATCTCGGCGTCGATGGCTTCCTGGCGGGCCT 1466859
1466860TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGATCGTGACTCGCGTGATGACGCAGCCCTTCTTG 1466930
1466931TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGGTCAAGCCGCGTCGTGTTCAGCACGGTGTAGG 1467000
1467001TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGGGTGTCACCCACTGGCCCCGCCATTGAACAGACC 1467072
1467073TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACCCGTGAGTTGAAAACATGATGATCCTGGCGATCC 1467142
1467143TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGGCGATCGGCTTTCCGGACCGCCTCAGCCAGC 1467211
1467212TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACAAGCAGGAACGCCGCAAACTGCTCTTTACCGGCAT 1467282
1467283TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACAAGATCGATGAAGGTCGGCTTGGGTTCGCGTTCGAG 1467354
1467355TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACTTTTTTCTTTGAACTTGGCTTGTCTGGTAGCCCCGT 1467426
1467427TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACGGGCTGGCCGCGTCCATGGCATCCATGTCACGGC 1467496
1467497TCAGAACGACTTCCCTGATGAAGAGTATGCGTTCACT1467533
Left flanking sequence : Till position 1466441 (length bp)
CGAATCGCCGTCAAGAAATGCATCAGTCTGCCACCGCCCGCGAACCCCGCGAACCCCCTCTGCAAGCGGT
TGTTCTAAAAGGTGTTTTCAGGCCATGCAG
Right flanking sequence : From position 1467533 (length bp)
CCCCCAGGCTTGAGTGCTGGTATTACAACCGCATGCGGCGAAAGGTCATGGTGCCGGGGCGGGTTCAGGC
AGAACGGGGGCCGGCTCGCCTTTGCGCCGC
Print the CRISPR sequence : From position bp To position bp