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CRISPRs details
NC_019954_3
Flanking alignement tool
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NC_019954_3                                                                                                                 
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Strain :
Tepidanaerobacter acetatoxydans Re1
RefSeq :
NC_019954 (chromosome circular)
CRISPR id :
NC_019954_3
DR consensus (30 bp) :
GTTTATAGCCTACCTATAAGGGATTGAAAC
Number of repetitions :
10
Begin Position :
142577
End Position :
143205
142577
CATCGCTGTCGCAATGTGGTTTATAGCCTA
TGGACTTAAAGTTCATCCCATCGCTGTCGCAATGTG
142642
142643
CAGAGATAACAGATACACAGTTTATAGCCT
ACGACATGAACCAACCAGCAGAGATAACAGATACACA
142709
142710
TTATGTTCTTTACATCTATAGTTTATAGCC
TTTGTTATTATAAGGCTATTATGTTCTTTACATCTATA
142777
142778
TTACAATAACATTCAAAGGAGTTTATAGCC
CGGAAGCAAGAGAACCAATTACAATAACATTCAAAGGA
142845
142846
CCAAAAAGGAACTTTAGTGGTTTATAGCCT
CTTGCAACAGTGTGGGAACCAAAAAGGAACTTTAGTG
142912
142913
TGTAATCCCTAATGATAGCGTTTATAGCCT
TTTTTTTACGTAGGCCGTTGTAATCCCTAATGATAGC
142979
142980
TCTTTCCCGCCATGCTAAGTTTATAGCCTA
TTCCCAACCGCCCCAGGATCTTTCCCGCCATGCTAA
143045
143046
ATACATTGTAGTTAGGGGTTTATAGCCTAC
TTTCTTGTGATGATCTTGATACATTGTAGTTAGGG
143110
143111
ATTCTAGACCTATACTGGTTTATAGCCTAC
CGTCTCCAAATTCGTTGTATTCTAGACCTATACTG
143175
143176
CTTGGCATGAAAGGCACAGCAGCACTTGAA
143205
Left flanking sequence : Till position 142577 (length
bp)
TTGAACAAATTATTTTTCTCGCTCTTTCTTTATTTTTTACCCCAAATTACGGGTTTATAGCCTACCTATA
AGGGATTGAAACTGGACTTAAAGTTCATCC
Right flanking sequence : From position 143205 (length
bp)
ATTATGGAGGTAAAAATGAAAAAATATTGTATTATCATACTTATTGTATGTATGATGCTTGTGCTAACTG
CTTGCGGGAATCCTAACAGTGAAGTAGTAG
Print the CRISPR sequence : From position
bp To position
bp