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CRISPRs details
NC_019954_5
Flanking alignement tool
Page manual
  
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NC_019954_5                                                                                                                 
top
Strain :
Tepidanaerobacter acetatoxydans Re1
RefSeq :
NC_019954 (chromosome circular)
CRISPR id :
NC_019954_5
DR consensus (30 bp) :
GTTTATAGCCTACCTATAAGGAATTGAAAC
Number of repetitions :
46
Begin Position :
237324
End Position :
240394
237324
CTATAAGGAATTGAAACCATTTGAGGATCT
GATGTTAACTTTATAAACATAAATGCAGACGAACT
237388
237389
CTACCTATAAGGAATTGAAACAGAAACGAC
CATTTGAGGATCTGGAAGGGCTGACCTTAGCCTCCGGAG
237457
237458
CCTATAAGGAATTGAAACCGGCTAACCGCA
AGAAACGACACGACAAATTATGAAAGAAAGCAATTT
237523
237524
TACCTATAAGGAATTGAAACGTTGATGAAC
CGGCTAACCGCATTATAATACGTGATGCAAGTGGCCGG
237591
237592
CTACCTATAAGGAATTGAAACATTGGAGAA
GTTGATGAACATTCCATAGATAGTTTGCAATTTATGTGT
237660
237661
CCTATAAGGAATTGAAACAAAAAAGATATA
ATTGGAGAAACTTTTAATAGAGCATAAAAGGACTGA
237726
237727
CCTACCTATAAGGAATTGAAACTTTGATTG
AAAAAAGATATAGTTTTTTAGAAGTCTTGAATGATGAAGG
237796
237797
CCTACCTATAAGGAATTGAAACCCATAATC
TTTGATTGAGGATATATTCCTTGCTAATGATATAGCTTTT
237866
237867
CCTATAAGGAATTGAAACTATTCCATTTTG
CCATAATCAGTAACTATTTCTCTGCTAGCATTTCTT
237932
237933
GCCTACCTATAAGGAATTGAAACTTGCTTT
TATTCCATTTTGTGTTTTGTATAGTTACCAAATCACCAAGC
238003
238004
ACCTATAAGGAATTGAAACGTCACAATTTG
TTGCTTTGATGAGGTAGCACTATTTTTAGAAGTTGAG
238070
238071
ACCTATAAGGAATTGAAACAGGCTTGCCCA
GTCACAATTTGGGCAATACCATGTTTCCATAGGCGTG
238137
238138
CCTATAAGGAATTGAAACTTTGCGGGTAAA
AGGCTTGCCCAAAAAGCGGAATATTATTTGTACTTT
238203
238204
CCTATAAGGAATTGAAACATGGTGAAGTTA
TTTGCGGGTAAACAATAAGGCAGAAAACACAATAAC
238269
238270
ACCTATAAGGAATTGAAACCATTTATTGCA
ATGGTGAAGTTATAGAAGATGATACTAGTAGCACTAA
238336
238337
CCTATAAGGAATTGAAACAACTCTTCTAAA
CATTTATTGCAAACTATGCACTTTCCTTTGCTTCAA
238402
238403
TACCTATAAGGAATTGAAACTTGTAATAAC
AACTCTTCTAAAAAATCATTAAAACTAACTTTTTTTAC
238470
238471
CCTATAAGGAATTGAAACATGAAGAAGCAG
TTGTAATAACAATATAATGATGCAAATAAATAAAGC
238536
238537
CCTATAAGGAATTGAAACTACCTTGGAACT
ATGAAGAAGCAGAGATTGACAAGCCAAGCTATGCAA
238602
238603
CCTATAAGGAATTGAAACTAAGACTCAATC
TACCTTGGAACTGTTCGCTCATGATTATAATAATTC
238668
238669
ACCTATAAGGAATTGAAACTGAAACCCTTT
TAAGACTCAATCCAACTTTCCAAAAATTCACGCAAAG
238735
238736
CTACCTATAAGGAATTGAAACGTCGAAGAG
TGAAACCCTTTCTTCATTTTTGGCCAATGAGCTTCTAGC
238804
238805
ACCTATAAGGAATTGAAACGCAGCAAGTTT
GTCGAAGAGGAGGTGGCGAATTGACGAGGGAAGAGCT
238871
238872
CTACCTATAAGGAATTGAAACTGCCTATCC
GCAGCAAGTTTTGCGGCACCACTTTTGGCGATATTGAAT
238940
238941
CCTACCTATAAGGAATTGAAACTGGAATAT
TGCCTATCCACTGTGGAAATGGCTGCTCTTCGGGCATTTC
239010
239011
ACCTATAAGGAATTGAAACCAGGACTATAT
TGGAATATATGGTCCGGTATATGTTGATCTGTAGGAA
239077
239078
TACCTATAAGGAATTGAAACTGATGTAATC
CAGGACTATATTGGAAATATTCAAAGATGCACTTATTG
239145
239146
TACCTATAAGGAATTGAAACTCGGGTCATC
TGATGTAATCATTGATTTCTTTAGGATTAAAACCACAT
239213
239214
CTATAAGGAATTGAAACCACTAATGTTGGA
TCGGGTCATCAGACTGATCATCCAGTGTTGCCACC
239278
239279
CCTACCTATAAGGAATTGAAACATAACAAG
CACTAATGTTGGATGAATCATCACAGATACAAAATGAAAC
239348
239349
GCCTACCTATAAGGAATTGAAACTGAAGCT
ATAACAAGATTGAATTCAGTCAAAAGGAAATGGATAAGGCA
239419
239420
CCTATAAGGAATTGAAACACTGGTACATGG
TGAAGCTTGATGACATGAAGAATATCCTTAAAACCC
239485
239486
CCTATAAGGAATTGAAACTGGACTACCAGA
ACTGGTACATGGCCGCAGTCTGTTCCTGTATGCTGG
239551
239552
CCTACCTATAAGGAATTGAAACTTGTAAAC
TGGACTACCAGACACAAAGAGATCGCGCCGATAAGGCCGA
239621
239622
CTACCTATAAGGAATTGAAACTGGAGGTGT
TTGTAAACACGCCCATCTCTAGTGACAGTATATGTCTTT
239690
239691
CCTATAAGGAATTGAAACCTTTGCACGAGT
TGGAGGTGTTGTAAATGGCATACAAAGGCCAACCCG
239756
239757
ACCTATAAGGAATTGAAACCAGAATACTAC
CTTTGCACGAGTATGAAAACAGCCTCATCTTGCTCCC
239823
239824
GCCTACCTATAAGGAATTGAAACCATGGGG
CAGAATACTACCTCTCCTTGCCAATCTTGTTTTAAACCATC
239894
239895
CTATAAGGAATTGAAACGTTGATAATTGTA
CATGGGGAGTGCTGGGCAAGACTTCGTAGACGAAG
239959
239960
TACCTATAAGGAATTGAAACACGACAGACA
GTTGATAATTGTATTTTTAATTTACTGTTTATCCTTGT
240027
240028
CCTATAAGGAATTGAAACCTGAAAGTAGGA
ACGACAGACAGGATATAGAGGATTTGGTTACACGTG
240093
240094
CCTATAAGGAATTGAAACAGGATAAAAGAT
CTGAAAGTAGGAAGCCGACCGGCATAAACAAAGCCA
240159
240160
ACCTATAAGGAATTGAAACCTATCTCCTGG
AGGATAAAAGATAACTGGCAAGTGTTTCCTAGCAGGG
240226
240227
TACCTATAAGGAATTGAAACAGACATGGCA
CTATCTCCTGGTCGCCTTCAGCCAAGGCGAACATCCTT
240294
240295
CTACCTATAAGGAATTGAAACTGGACGACA
AGACATGGCATTGATTTCTTGGGATTCAGGACCTTTATG
240363
240364
AGGAGATGTTAAAAAGGTGCGATGAGCTCT
240393
Left flanking sequence : Till position 237324 (length
bp)
TATTTTTTACCCCAAATTACGGGTTTATAGCCTACCTATAAGGAATTGAAACGATGTTAACTTTATAAAC
ATAAATGCAGACGAACTGTTTATAGCCTAC
Right flanking sequence : From position 240394 (length
bp)
GGTATTCGGAGAGGTTATAAGCGAGGGAATGGCCTCCGAGATAGAACGTTTATAGCCTACCTATAAGGAA
TTGAAACTTATAAATGGGGTGAAATTATGG
Print the CRISPR sequence : From position
bp To position
bp