Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_021082_2                                                                                                                 top


Strain : Mannheimia haemolytica M42548 RefSeq :NC_021082 (chromosome circular)
CRISPR id : NC_021082_2
DR consensus (32 bp) : CCAGCCACCTACGCGTGGCTGCGAATTGAAACNumber of repetitions :17
Begin Position : 1577178 End Position : 1578281

1577178CCAGCCACCTACGCGTGGCTGCGAATTGAAACCCTATAACGAGCAATGGCATTTTGATCTACGGTAAA 1577245
1577246CCAGCCACCTACGCGTGGCTGCGAATTGAAACTTCTTGAATACCTCCGGAGTCAGTTAAGATAAGG 1577311
1577312CCAGCCACCTACGCGTGGCTGCGAATTGAAACCTTTTTCAAGAATCAAGATTAAGAGATCCAAACAA 1577378
1577379CCAGCCACCTACGCGTGGCTGCGAATTGAAACCACCGCTGCTACTTCGGTTATCGGAGTAGTTTGCAC 1577446
1577447CCAGCCACCTACGCGTGGCTGCGAATTGAAACGTGGCACAGTAACACGAGCAGATGCTGATAAACGC 1577513
1577514CCAGCCACCTACGCGTGGCTGCGAATTGAAACCAGCAGCCGTTGTTACCGTGGTGCAATGCTTGCG 1577579
1577580CCAGCCACCTACGCGTGGCTGCGAATTGAAACTACACTTATTGCCATAGGGTAGTAGTAATCTTTTAC 1577647
1577648CCAGCCACCTACGCGTGGCTGCGAATTGAAACTGCGATTTTTGGATTTTTCGGGCGATAAATGATA 1577713
1577714CCAGCCACCTACGCGTGGCTGTGAATTGAAACTCGTGGCTGGTTATACAAAGAAAAGCATTGTTGG 1577779
1577780GCAGCCACCTACGCGTGGCTGTGAATTGAAACTTAAATCTAAAGCTAAAGCTATTTTATTAATTAAA 1577846
1577847GCAGCCACCTACGCGTGGCTGTGAATTGAAACTTTACCGTTTACCGATTGGATTTTAATGCTAGAG 1577912
1577913GCAGCCACCTACGCGTGGCTGTGAATTGAAACCCTAAATTGCCGTAAAAATCTGCCATTAGCTACGC 1577979
1577980GCAGCCACCTACGCGTGGCTGTGAATTGAAACCTCATAACGAATCCAATCCTGTTCGGTTAATCCCC 1578046
1578047GCAGCCACCTACGCGTGGCTGTGAATTGAAACAGGGGCGTGTACCGCAATCAATTTTAATTATAACCAA 1578115
1578116GCAGCCACCTACGCGTGGCTGTGAATTGAAACTTTATCTGTTGCGGTCAATTGTATATCTTGAATTT 1578182
1578183GCAGCCACCTACGCGTGGCTGTGAATTGAAACCTCGTCTTGAATTGGAAAATCAAGGGCGACAATAG 1578249
1578250GCAGCCACCTTCGCGTGGCTGTGTATTGAAAC1578281
Left flanking sequence : Till position 1577178 (length bp)
CAATATATTGGCGATATGCTATACTTTATCCACTCTCTACAAAACGTTAGCGAATAAAGGGCTAAAAAGC
CTGATATTTCAATACGTTATCTTATAGGGA
Right flanking sequence : From position 1578281 (length bp)
GGTGTACCCACAAATCCTATGTTTTCGCCATTGGCTGCTACCTTCGCATCAATATATATTGAAATATCAA
TGGCAAATTTGTATGTTGTTAATTAGACTG

Print the CRISPR sequence : From position bp To position bp