Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_021232_1                                                                                                                 top


Strain : Klebsiella pneumoniae RefSeq :NC_021232 (chromosome circular)
CRISPR id : NC_021232_1
DR consensus (29 bp) : CGGTTTATCCCTGCTGGCGCGGGGAACACNumber of repetitions :3
Begin Position : 4236787 End Position : 4236934

4236787GGGCTTATCCTCGCGAATGCGGGGAACACAGTTAGTTCAGTTTCACCCAAGTGAACGC 4236844
4236845CGGTTTATCCCTGCTGGCGCGGGGAACACGTCTTCCCTGTTTGCTGCCTGCTGTCTGTCTG 4236905
4236906CGGTTTATCCCCGCTGGCGCGGGGAACAC4236934
Left flanking sequence : Till position 4236787 (length bp)
AGACGGTAAAAAAACAGTGATATCGCTAGAGCGGCAGGTAGCGATATTTATTCTCCGCAAGCTTTCGTAC
CCACCCTCAGGATCGATAACGTTAGTGGAC
Right flanking sequence : From position 4236934 (length bp)
ACTAAAGATATATTACTGTTTTATAATAGCTTTTTAAGCACACAACAATTCACCAACTTTATCACAACAA
TCTCACATTATTAAAGAACATCCAACCCAT
Print the CRISPR sequence : From position bp To position bp