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CRISPRs details
NC_021235_1
Flanking alignement tool
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NC_021235_1                                                                                                                 
top
Strain :
Lactobacillus fermentum F-6
RefSeq :
NC_021235 (chromosome circular)
CRISPR id :
NC_021235_1
DR consensus (28 bp) :
GGATCACCCCCATATACATGGGGAGCAC
Number of repetitions :
75
Begin Position :
1348092
End Position :
1352667
1348092
GGATCACCCCCATATACATGGGGAGCAC
TGTTCCTGGATTGTGACGATTGTGCCCCGTTCG
1348152
1348153
GGATCACCCCCATATACATGGGGAGCAC
TCGTCGTCGGCTAGTTTATATAAGTAGTCTAAG
1348213
1348214
GGATCACCCCCATATACATGGGGAGCAC
AACTCAGTAAATTTAATCTTGTATTCCATGTTG
1348274
1348275
GGATCACCCCCATATACATGGGGAGCAC
AAGCAAAATAATAAAACTAGAATAGACCGCCAA
1348335
1348336
GGATCACCCCCATATACATGGGGAGCAC
TGAGCGCCTCGTGGAATGTTAAAGGTAACGTAG
1348396
1348397
GGATCACCCCCATATACATGGGGAGCAC
CGAGCTTTGTGTATGGCACAACTGATGGAGCAG
1348457
1348458
GGATCACCCCCATATACATGGGGAGCAC
TGGCCTGGCAAGAGTGATAACAATGTGCGATTG
1348518
1348519
GGATCACCCCCATATACATGGGGAGCAC
GTCAAGTATACCGGCTTATGTTAGTAGAAAATA
1348579
1348580
GGATCACCCCCATATACATGGGGAGCAC
CTTGGGCGTAAAGACCGACTTGTGCCGATGCGA
1348640
1348641
GGATCACCCCCATATACATGGGGAGCAC
TGAATGCAACGATTAACACTAATGAACATGGTA
1348701
1348702
GGATCACCCCCATATACATGGGGAGCAC
TTATCCTGTTTCATCAGTTGAATTGTAAATGTA
1348762
1348763
GGATCACCCCCATATACATGGGGAGCAC
TTTTCTTCATTTGCAGGAATTGCTTTCAATAAG
1348823
1348824
GGATCACCCCCATATACATGGGGAGCAC
TTGTTCCTGGTTTTTGGTGATTGCGCCCCGTCG
1348884
1348885
GGATCACCCCCATATACATGGGGAGCAC
TGGAATTGGACGGCCCTTTTATCGGTCTTGTAG
1348945
1348946
GGATCACCCCCATATACATGGGGAGCAC
GCCTGGCACAACCGTTGGCGTCAGTGGGCTATG
1349006
1349007
GGATCACCCCCATATACATGGGGAGCAC
TCGGTGCTAACTGGTTACTACACGTCCGCTCAG
1349067
1349068
GGATCACCCCCATATACATGGGGAGCAC
GTAAAATGAAAATAACCATTAACGCCAACCAAG
1349128
1349129
GGATCACCCCCATATACATGGGGAGCAC
CGGCCCCGCGCTTGATCATCTTCATCTTTTGCA
1349189
1349190
GGATCACCCCCATATACATGGGGAGCAC
AGATGTCTACCAGGATCTAGGCAATCAGCATTG
1349250
1349251
GGATCACCCCCATATACATGGGGAGCAC
TCATATCCTTACCCCCTATACTTATTTACATAG
1349311
1349312
GGATCACCCCCATATACATGGGGAGCAC
TTAATGGTATCATGGAAACTTTGTTCCATTTCA
1349372
1349373
GGATCACCCCCATATACATGGGGAGCAC
TATAATCAGGAGGTTGAGTGGAACGGCGATGAA
1349433
1349434
GGATCACCCCCATATACATGGGGAGCAC
TGCCAATCGTATTTACATCATGGCCCAGAACCA
1349494
1349495
GGATCACCCCCATATACATGGGGAGCAC
TAGCGATTGCTAATGGCTTGATGTGGTTGCTAG
1349555
1349556
GGATCACCCCCATATACATGGGGAGCAC
TCCCTCGTTTAGCTGATCAGCTTCATACGTGCCA
1349617
1349618
GGATCACCCCCATATACATGGGGAGCAC
GAGTGCTGTTAAAGCACCCGATTGAATCAACCA
1349678
1349679
GGATCACCCCCATATACATGGGGAGCAC
TAGGATCGCCAATCCCGTTGATGGCGGATAGAG
1349739
1349740
GGATCACCCCCATATACATGGGGAGCAC
TGCCCTCTTTGTTGCTACGATTGTTCAGGCTGG
1349800
1349801
GGATCACCCCCATATACATGGGGAGCAC
CATATCCCGTTCGGCTGGGGATGTCTGGTCAAA
1349861
1349862
GGATCACCCCCATATACATGGGGAGCAC
AAAACTTCCACCCCTTCGTGCGTGGAATGGTAA
1349922
1349923
GGATCACCCCCATATACATGGGGAGCAC
GACAAGACAGGCGTCTACTTCATTGAGGGGTGA
1349983
1349984
GGATCACCCCCATATACATGGGGAGCAC
TGTAACTCAGTAAATTTAATCTTTTCCATGTTG
1350044
1350045
GGATCACCCCCATATACATGGGGAGCAC
TAACCATACCCTTTCTAACCATATAATAGGTAG
1350105
1350106
GGATCACCCCCATATACATGGGGAGCAC
CTTCAGGTATTTTCCGCACTCAATGGAATAATG
1350166
1350167
GGATCACCCCCATATACATGGGGAGCAC
GGATCTGTTACCTGTTCACGATTCTCAGCACAA
1350227
1350228
GGATCACCCCCATATACATGGGGAGCAC
AGAGCGTCGAAGAAGTCGTCCATCGTTTCGATA
1350288
1350289
GGATCACCCCCATATACATGGGGAGCAC
CAAGAACGTTTCAGCCGTGAACAACCGGTCTATA
1350350
1350351
GGATCACCCCCATATACATGGGGAGCAC
TCGAAAATGTTCTCAAAACTGGTACGCTTGTTA
1350411
1350412
GGATCACCCCCATATACATGGGGAGCAC
TACTTTTTGACCAGTTGAATCAGTAGATAATAG
1350472
1350473
GGATCACCCCCATATACATGGGGAGCAC
TGGTTGGTTTCAGATAGTTCATCTTCAGGTATA
1350533
1350534
GGATCACCCCCATATACATGGGGAGCAC
AGCTTCAGCGCTTGGAACAAAGTTTGTAGTTAG
1350594
1350595
GGATCACCCCCATATACATGGGGAGCAC
CAGCCATACAGCCAAGGACTCTAACAGAGCTGA
1350655
1350656
GGATCACCCCCATATACATGGGGAGCAC
ATTGAGCCTGACCAGACTGCTACTGTTGTGCAA
1350716
1350717
GGATCACCCCCATATACATGGGGAGCAC
TTTAACGCGTAAAGAACCGAATCAGTATCCGGG
1350777
1350778
GGATCACCCCCATATACATGGGGAGCAC
CCCACCGCTTTTGCCCGAAGTGTGAATTGTGAA
1350838
1350839
GGATCACCCCCATATACATGGGGAGCAC
TATTATCCACTAGTCAATGGGTACAATGTTTCA
1350899
1350900
GGATCACCCCCATATACATGGGGAGCAC
CAGGAAATAATATAACTATAATAGGCCAAAATG
1350960
1350961
GGATCACCCCCATATACATGGGGAGCAC
TTAAATAAGACTGTTGATGAGCTTAATAGTAAG
1351021
1351022
GGATCACCCCCATATACATGGGGAGCAC
CTTTTTTACACCTAATACTGAAAAAAATCGCGA
1351082
1351083
GGATCACCCCCATATACATGGGGAGCAC
TAAAAGAAGTTGCCGGTAACAATGGTGCTAAAG
1351143
1351144
GGATCACCCCCATATACATGGGGAGCAC
TTATAGGTTGTATGACCGTGAATATCCTTGTAG
1351204
1351205
GGATCACCCCCATATACATGGGGAGCAC
TAGGTGACACCGTGGCAATCATTCGCCACGATA
1351265
1351266
GGATCACCCCCATATACATGGGGAGCAC
ATTCGGCCGCAAGACCGGCCCGCTTCGTATATG
1351326
1351327
GGATCACCCCCATATACATGGGGAGCAC
AACATTTTCGTTAGCAATGCTATTGATCGATTTA
1351388
1351389
GGATCACCCCCATATACATGGGGAGCAC
TCACCTAGAACGGGGCCAACATGGGGAGCACTTATCCTGTTTCATCAGTTGAATTGTAAATGTA
1351480
1351481
GGATCACCCCCATATACATGGGGAGCAC
TTTTCTTCATTTGCAGGAATTGCTTTCAATAAG
1351541
1351542
GGATCACCCCCATATACATGGGGAGCAC
TTGTTCCTGGTTTTTGGTGATTGCGCCCCGTCG
1351602
1351603
GGATCACCCCCATATACATGGGGAGCAC
TGGAATTGGACGGCCCTTTTATCGGTCTTGTAG
1351663
1351664
GGATCACCCCCATATACATGGGGAGCAC
GCCTGGCACAACCGTTGGCGTCAGTGGGCTATG
1351724
1351725
GGATCACCCCCATATACATGGGGAGCAC
TCGGTGCTAACTGGTTACTACACGTCCGCTCAG
1351785
1351786
GGATCACCCCCATATACATGGGGAGCAC
GTAAAATGAAAATAACCATTAACGCCAACCAAG
1351846
1351847
GGATCACCCCCATATACATGGGGAGCAC
ATGGTGCCATCTTCAATGTTATCCCCAGAAAAG
1351907
1351908
GGATCACCCCCATATACATGGGGAGCAC
AGGCGACCAAGACATTGTCAAACTCGTCGAACG
1351968
1351969
GGATCACCCCCATATACATGGGGAGCAC
GCTGGGTTGACCCGGACGGCAATTCCGCAATTA
1352029
1352030
GGATCACCCCCATATACATGGGGAGCAC
GAAAAGTTTCAATTGCATCGACTAATCCACTTA
1352090
1352091
GGATCACCCCCATATACATGGGGAGCAC
CGCCCTTTTCTTCGGTGTACATTTCATAATACA
1352151
1352152
GGATCACCCCCATATACATGGGGAGCAC
AATGGCTTAGACGCAGATAATCACATTACCCGG
1352212
1352213
GGATCACCCCCATATACATGGGGAGCAC
TTGCGGTAGGCTTCCACGTTATTAACCGTTGTA
1352273
1352274
GGATCACCCCCATATACATGGGGAGCAC
AACATCACCCTTTAAGCCGCGCGGGACGTGAAG
1352334
1352335
GGATCACCCCCATATACATGGGGAGCAC
AATCCATTGTTTAAATCAGTAACAGTAACGTAG
1352395
1352396
GGATCACCCCCATATACATGGGGAGCAC
ATTGAATCTGCTGTAACGGTCGAAGCAGTGATA
1352456
1352457
GGATCACCCCCATATACATGGGGAGCAC
CAGTAGAATCTCCAGTAAGTGCAGCATCTACAG
1352517
1352518
GGATCACCCCCATATACATGGGGAGCAC
CGTCATGCAAGCCTTAGCTAGTCTTGGCTTTGA
1352578
1352579
GGATCACCCCCATATACATGGGGAGCAC
TACCTAAGATTCAAACTCCTAAGGGCTCAATTG
1352639
1352640
GGATCACCCCCATATACATGGGGAGCAC
1352667
Left flanking sequence : Till position 1348092 (length
bp)
AACTCTTCAACCAGGTGTTCCGTCCGCTTAGTGATGTTTGAAACCGTGGTTGGTGAGTAGTAGTGGCCGT
ACATTCTCTCAACCATATCACTCCTTAGAT
Right flanking sequence : From position 1352667 (length
bp)
ATTAAAAGATCCCTGTAACCAAGCGACTTTCAAATCTTCAAAAACCCTTTTTCAATCAGTTTGGTCATGA
GCTTGATCGATGCCTCGGCGTCCGCTAGTG
Print the CRISPR sequence : From position
bp To position
bp