Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_021353_3                                                                                                                 top


Strain : Methanomassiliicoccus sp. Mx1-Issoire RefSeq :NC_021353 (chromosome circular)
CRISPR id : NC_021353_3
DR consensus (32 bp) : CATTTACATTCTAGTTTAGATGGATTTCTAACNumber of repetitions :3
Begin Position : 940589 End Position : 940756

940589GATATACATTCTAGTTTAGATGGATTTCTAACTAGCAAAAAATGCAGAACTTCTTGCTAATTCGATTT 940656
940657CATTTACATTCTAGTTTAGATGGATTTCTAACCATCCTTTGCCCGTTTTGCATACCTGCTTACCGTTG 940724
940725CATTTACATTCTAGTTTAGATGGATTTCTAAC940756
Left flanking sequence : Till position 940589 (length bp)
GTCATCATAATTACTTTTGTTATTATATGTTTCATGTTGCGTTTCATAAGAAACTCAATTCAAAGCTATC
ATATTTTCCGCCAAATCTTCCAGTACTATT
Right flanking sequence : From position 940756 (length bp)
TTGATTTTACCAACGTGCTTTTCTCAGTAATATTATTGGTATTGATCTTATCAATCAGATGCATAATTAA
TTCTTGGGCTATCTTTTCAAGAGGATTTGT
Print the CRISPR sequence : From position bp To position bp