Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_021577_2                                                                                                                 top


Strain : Pseudomonas aeruginosa RP73 RefSeq :NC_021577 (chromosome circular)
CRISPR id : NC_021577_2
DR consensus (29 bp) : GTGTTCCCCACGGGTGTGGGGATGAACCGNumber of repetitions :22
Begin Position : 1409002 End Position : 1410312

1409002GTGTTCCCCACGGGTGTGGGGATGAACCGCAGCCGTGCATATCGCGCTGGATGTGCAGGGC 1409062
1409063GTGTTCCCCACGGGTGTGGGGATGAACCGCAACGCTTGGCGCGCTGCGAGGCGCTGGCGAA 1409123
1409124GTGTTCCCCACGGGTGTGGGGATGAACCGACGATCCCGACCGCCAAGATTGGCCGTCGCCG 1409184
1409185GTGTTCCCCACGGGTGTGGGGATGAACCGGCTTGGATTCTTCTGCGTATGCGAAGCCGCAC 1409245
1409246GTGTTCCCCACGGGTGTGGGGATGAACCGACGATGGCGTCCAGCAGGGTCGGCTCGATGTT 1409306
1409307GTGTTCCCCACGGGTGTGGGGATGAACCGAACGCGATATCGGACAGCGAACCGCCAGCGTG 1409367
1409368GTGTTCCCCACGGGTGTGGGGATGAACCGGCTGGAGCCGCCGGCAAGACGTTCGGCGAGGC 1409428
1409429GTGTTCCCCACGGGTGTGGGGATGAACCGGACGGCGACCTGAAGCGCGCGGATGCGATGAA 1409489
1409490GTGTTCCCCACGGGTGTGGGGATGAACCGACGTTCTTGTGCTTCTTGCCGGTCAAATCCGC 1409550
1409551GTGTTCCCCACGGGTGTGGGGATGAACCGGCCGGCCAGGTGCTCGGCCAACAGCTCGCGAA 1409611
1409612GTGTTCCCCACGGGTGTGGGGATGAACCGACTGGTACCGCGCGGGCAATCAGCGAACCCGCG 1409673
1409674GTGTTCCCCACGGGTGTGGGGATGAACCGGCTGCTCAGGCTAGCGCCGCCTCTACTCTCAT 1409734
1409735GTGTTCCCCACGGGTGTGGGGATGAACCGTGTTTACGAGCTTCAGCGGCCCTCCATGTAGA 1409795
1409796GTGTTCCCCACGGGTGTGGGGATGAACCGGAGGAGTTGGAGGCCATGATCGGCGCCAAGTC 1409856
1409857GTGTTCCCCACGGGTGTGGGGATGAACCGGCGATCATCGAATGGCCGCACCGCATGGACCT 1409917
1409918GTGTTCCCCACGGGTGTGGGGATGAACCGCTCAACGAGAAGAACATCCCGCGCAACATGAT 1409978
1409979GTGTTCCCCACGGGTGTGGGGATGAACCGGCCATCAAGGAAGAGCCCCAGCTGCGCGTCGA 1410039
1410040GTGTTCCCCACGGGTGTGGGGATGAACCGCTGCGCGTTCACGCCGAAACCCTTGGCTGGGT 1410100
1410101GTGTTCCCCACGGGTGTGGGGATGAACCGTAGTCCTGGCGGATATCGCTGCACCAGTGCAT 1410161
1410162GTGTTCCCCACGGGTGTGGGGATGAACCGATGGAAGACCCAACCCGCGGCCAGGGGTGGGG 1410222
1410223GTGTTCCCCACGGGCGTGGGGATGAGCTGGTATCGACATCGATGGTGACCAGGCTGGTCCA 1410283
1410284ATGTTCCCCACAGGCGTGGGATAAACCTG1410312
Left flanking sequence : Till position 1409002 (length bp)
TGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTAGAATTTTGCTGTTGTTTTT
CTTTTTTTAAAACAATGGGATACGGTAAGG
Right flanking sequence : From position 1410312 (length bp)
TCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGAC
CAGTGGCGTGATCACCAGTGTCAGCCGCCA
Print the CRISPR sequence : From position bp To position bp