Institut de Génétique et Microbiologie

CRISPR details


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NC_022084_6                                                                                                                 top


Strain : Thermococcus litoralis DSM 5473 RefSeq :NC_022084 (chromosome circular)
CRISPR id : NC_022084_6
DR consensus (30 bp) : GTTCCAATAAGACTTTAAAAGAATTGAAAGNumber of repetitions :69
Begin Position : 1226231 End Position : 1230894

1226231GTTCCAATAAGACTTTAAAAGAATTGAAAGACGGCGACGCAGTCTTTGAGTTCTTCGATGATTTTGAT 1226298
1226299GTTCCAATAAGACTTTAAAAGAATTGAAAGTTTATTAAAGCGAGACCATTACCGAGCACACGGCCGAC 1226366
1226367GTTCCAATAAGACTTTAAAAGAATTGAAAGACGAGAGCAGCAGGAGAGATTTAAGGTAGGGTTAGGG 1226433
1226434GTTCCAATAAGACTTTAAAAGAATTGAAAGATTACTGCAACTGCTACAAGTCCAATCCCCAGAGAAA 1226500
1226501GTTCCAATAAGACTTTAAAAGAATTGAAAGAAAATCCTCTCTTGTTCTTCTTTTGGCAATTTTAAG 1226566
1226567GTTCCAATAAGACTTTAAAAGAATTGAAAGGAATCACTTTTCACCCTTTCACCTTTCACCCTATCGG 1226633
1226634GTTCCAATAAGACTTTAAAAGAATTGAAAGTGATGAAGGAGAGTGGAGGTTCTTTGATGTTGACTATGTAA 1226704
1226705GTTCCAATAAGACTTTAAAAGAATTGAAAGTTACCAAAAGAGACAACAACTTTTACTACATTGAAATCC 1226773
1226774GTTCCAATAAGACTTTAAAAGAATTGAAAGTGTGAGTATCGACCAACTGCCCGTTCACGTAAGTACGG 1226841
1226842GTTCCAATAAGACTTTAAAAGAATTGAAAGATCAGGGTCTGGCTGGATGCCAAAGTCTATTGTAAGT 1226908
1226909GTTCCAATAAGACTTTAAAAGAATTGAAAGCTCAATGGTTCTTACATTCCTTACATGACCTTACATAT 1226976
1226977GTTCCAATAAGACTTTAAAAGAATTGAAAGTTATTTGTGAGGGTAACGGTAAAGGTTACTTGCGTGTTTG 1227046
1227047GTTCCAATAAGACTTTAAAAGAATTGAAAGTATTCCTCTTTTGTATCTCCTTTCTCCGTTTTCTGCC 1227113
1227114GTTCCAATAAGACTTTAAAAGAATTGAAAGTATCATCAAGATCAATCCTTAACACTCTCTCATAGTCCA 1227182
1227183GTTCCAATAAGACTTTAAAAGAATTGAAAGGTAGTCAAGGACGCACTAGCAAACAGCACTCTTGACAC 1227250
1227251GTTCCAATAAGACTTTAAAAGAATTGAAAGGCTCTACTCTCTTCGTTACTCGTCCCCGATCTAATGCA 1227318
1227319GTTCCAATAAGACTTTAAAAGAATTGAAAGGCTCTGAGCTGTCTTCTAATAACTCCCTTAGCACATTA 1227386
1227387GTTCCAATAAGACTTTAAAAGAATTGAAAGGTATTCAAGATAAACAACATCTCCAGCACTTGGATTA 1227453
1227454GTTCCAATAAGACTTTAAAAGAATTGAAAGTAAATATGATTTATGTTTTATTTTTATCATGGTGGCGT 1227521
1227522GTTCCAATAAGACTTTAAAAGAATTGAAAGCTTTGCAGTAAAACAGTTTTTCGATGAATACGGTCAT 1227588
1227589GTTCCAATAAGACTTTAAAAGAATTGAAAGTTAAGACCGAACTCGACGAACTGAAAGTTTCCCCGAAACA 1227658
1227659GTTCCAATAAGACTTTAAAAGAATTGAAAGACTCTACAGCGCGAGAAGGGCTTCTACTACTACACGAC 1227726
1227727GTTCCAATAAGACTTTAAAAGAATTGAAAGTGAGGACAATGGAGAGCGTCATAGCAGTAGCCAA 1227790
1227791GTTCCAATAAGACTTTAAAAGAATTGAAAGCCACCATGAGTAAGAGAAGGGAGAGAATGATAATAAGAA 1227859
1227860GTTCCAATAAGACTTTAAAAGAATTGAAAGAAGGGAGAGTGGCGATTCCTAAAGAAACAAGGATGCT 1227926
1227927GTTCCAATAAGACTTTAAAAGAATTGAAAGCCTGGTGGGAGTTAGATGTCCTGCACAGGAGAACCGAC 1227994
1227995GTTCCAATAAGACTTTAAAAGAATTGAAAGCCCGTGTCGTAAATCCACACCTGGAACTGGTTCAAGTC 1228062
1228063GTTCCAATAAGACTTTAAAAGAATTGAAAGGTGTATCTCCGTTTTTCAGGATATTCGTCTGAGTACC 1228129
1228130GTTCCAATAAGACTTTAAAAGAATTGAAAGGTGCTGTCCATGAAAGTCACTGAAATATTGCCCAGCTG 1228197
1228198GTTCCAATAAGACTTTAAAAGAATTGAAAGCAGGATGGTAGATATAGACTTAATCGTGCTAGGGCTCG 1228265
1228266GTTCCAATAAGACTTTAAAAGAATTGAAAGAACCTTACCACCATTCAGGTCCACCAGCCCTTTGTTC 1228332
1228333GTTCCAATAAGACTTTAAAAGAATTGAAAGTTCACACCACCCCCATCAATCCACCAACCCGGCTCTCCA 1228401
1228402GTTCCAATAAGACTTTAAAAGAATTGAAAGTAACTACGCTTATGTTGTAGTTCGGTAGGTAAACACCC 1228469
1228470GTTCCAATAAGACTTTAAAAGAATTGAAAGGCAAAAAGTTTTTTGCGAGAGTTTTTTCAAGCTTTTTAGA 1228539
1228540GTTCCAATAAGACTTTAAAAGAATTGAAAGCTGCATTTTTGAGCGCTATTCCATCTTTGCCAACAGT 1228606
1228607GTTCCAATAAGACTTTAAAAGAATTGAAAGAGTAGACATGGATAAACCTGTCAAGGAAGTGATTGCG 1228673
1228674GTTCCAATAAGACTTTAAAAGAATTGAAAGTCGAATACAGGGTTAGCTCCTAATGGGTCTTGGAACAC 1228741
1228742GTTCCAATAAGACTTTAAAAGAATTGAAAGAAAAATAAAAGCGGGACTTTCTCGAAATTGATTTTTAA 1228809
1228810GTTCCAATAAGACTTTAAAAGAATTGAAAGCACTTCGAAGGCATTAAGCACCTTCGCGGGCATTTT 1228875
1228876GTTCCAATAAGACTTTAAAAGAATTGAAAGCCGTAACGTCCCTGTTGAGCGGATTGTATATAGTAAG 1228942
1228943GTTCCAATAAGACTTTAAAAGAATTGAAAGTATCCTCGTCCATGTTCTCAAGGTTTGCAACAATGCT 1229009
1229010GTTCCAATAAGACTTTAAAAGAATTGAAAGAACGGGAAGAAATATCTCTATGATGACTATCTTGACG 1229076
1229077GTTCCAATAAGACTTTAAAAGAATTGAAAGCCGCCGATAAGGAATAATATAACTGCTAAGGCCAAGTATGG 1229147
1229148GTTCCAATAAGACTTTAAAAGAATTGAAAGCTTAGATATTTCTTATTGTTCAAGCCTATTGCGTGTG 1229214
1229215GTTCCAATAAGACTTTAAAAGAATTGAAAGAAGATTATGCTCAGTAGCCAGCTCACAAAGGTCCAAG 1229281
1229282GTTCCAATAAGACTTTAGAAGAGTTCCAATAAGACTTTAAAAGAATTGAAAGTGATAGGAACATTTTTGTTCCAATTCTGGAACAAA 1229368
1229369GTTCCAATAAGACTTTAAAAGAATTGAAAGCTTAGTGCTGCAGTAACTACTGCACCCGTGAACCCTGCATAACC 1229442
1229443GTTCCAATAAGACTTTAAAAGAATTGAAAGCACTTCGCAGTTATAGAGACATACGCATATGATGAG 1229508
1229509GTTCCAATAAGACTTTAAAAGAATTGAAAGGCCGTTTTAAGTGCACTGAGCCTTTTAGGTATGCCCT 1229575
1229576GTTCCAATAAGACTTTAAAAGAATTGAAAGACGCATTGTCTTCCTGTCGTAGACCACGGCTTCATAATC 1229644
1229645GTTCCAATAAGACTTTAAAAGAATTGAAAGAGAATGAATAAATCATATTCTCGTTCATCAAGTCCTTAGT 1229714
1229715GTTCCAATAAGACTTTAAAAGAATTGAAAGTTGATGCCTTGCTAAAGTCCTCACTGCTCATATAGTCAA 1229783
1229784GTTCCAATAAGACTTTAAAAGAATTGAAAGAACTTTATGTTTGCTTCCTTAACAATGCCGTTTATTA 1229850
1229851GTTCCAATAAGACTTTAAAAGAATTGAAAGATGCCTTATCAAAAACTTCCTTTCTTCATCATTTAA 1229916
1229917GTTCCAATAAGACTTTAAAAGAATTGAAAGTTAGCCAAATTGGGCATCAAGGCAGTTGACTATTACA 1229983
1229984GTTCCAATAAGACTTTAAAAGAATTGAAAGATTCTCAAGATTGTCTTCTCTGAAAAAGAAGCGGAGGTC 1230052
1230053GTTCCAATAAGACTTTAAAAGAATTGAAAGCATATTTAGTGTTATCCCGCTGAGGTACCTCGGGGATGAGA 1230123
1230124GTTCCAATAAGACTTTAAAAGAATTGAAAGCAGGCTTTACACACTTTCGGTGGTGCTCCGACCTTG 1230189
1230190GTTCCAATAAGACTTTAAAAGAATTGAAAGTAAGTTAATCTTTCATCTCTACTATGAGTTCTCCTCGA 1230257
1230258GTTCCAATAAGACTTTAAAAGAATTGAAAGTACCTTAGCCGTCTTATTCACTGCGTCCCAAGTCTCC 1230324
1230325GTTCCAATAAGACTTTAAAAGAATTGAAAGCTTTTTACAACATACTCAATTGCCGTCCCATTTGCA 1230390
1230391GTTCCAATAAGACTTTAAAAGAATTGAAAGCATTATAAGCCTCTATAGCTGCATTAGCATATGTAG 1230456
1230457GTTCCAATAAGACTTTAAAAGAATTGAAAGAGAACTTCTCCATAGCCCTTGCTGAAATCTTGACGTGCTCCCAC 1230530
1230531GTTCCAATAAGACTTTAAAAGAATTGAAAGAGGTAATACTTACCAGAGGAATCTGGAGACACTACTT 1230597
1230598GTTCCAATAAGACTTTAAAAGAATTGAAAGAGAGAAACCATTTTTCTCAGAACTCTAAAATACCTCGC 1230665
1230666GTTCCAATAAGACTTTAAAAGAATTGAAAGGCTCTTAACTCGAACTCTGAAGCAAAATCTGTAT 1230729
1230730GTTCCAATAAGACTTTAAAAGAATTGAAAGTATGTAGCCTTCAATTAATGAAAACGTATATTCGATGT 1230797
1230798GTTCCAATAAGACTTTAAAAGAATTGAAAGCTGATGGATTTGCTTGGGCTCGACGACAGGCTCATCG 1230864
1230865GTTCCAATAAGACTTTAAAAGAATTGAAAG1230894
Left flanking sequence : Till position 1226231 (length bp)
GAGCTTTCTGAGGGGAGTTTTATTGACCCTTTGAAGAAAAGTTTATAAGATTCGGGCCTTCTAATTACTC
TTTGAGGAGTTTAGAGGAAAAATCGCCCCT
Right flanking sequence : From position 1230894 (length bp)
TTCTTTCTTTTCGAGCTTGAGCTTCTTGAGGCAACTCATAAGCCTGAACAACCTACTTGGCTCCAATAAA
TCCTTATCTCTCTTTAATGAACAACACTTT
Print the CRISPR sequence : From position bp To position bp