Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_022444_5                                                                                                                 top


Strain : Desulfovibrio gigas DSM 1382 = ATCC 19364 RefSeq :NC_022444 (chromosome circular)
CRISPR id : NC_022444_5
DR consensus (32 bp) : CACCCGACTATTGAAGTCGGGCCTCATTGAAGNumber of repetitions :5
Begin Position : 2555284 End Position : 2555600

2555284CACCCGACTATTGAAGTCGGGCCTCATTGAAGCTACTTGAGCAAACCCGGCGCGATCCCCAAGGACCGTCA 2555354
2555355CACCCGACTATTGAAGTCGGGCCTCATTGAAGCTGGAAAATATCAGTTTTTGCGTTTTGGCGGGCGTGTCG 2555425
2555426CACCCGACTATTGAAGTCGGGCCTCATTGAAGGTGGGCAACCCTGGGCAGATATGGCCGGCAGTCATGTCA 2555496
2555497CACCCGACTATTGAAGTCGGGCCTCATTGAAGCACCGCGTCCCAAAGCTCGCTGATATCTTGATCACCGTCA 2555568
2555569CACCCGACTATTGAAGTCGGGCCTCTATGGAC2555600
Left flanking sequence : Till position 2555284 (length bp)
GTCGGGCCTCATTGAAGAAAGGCCGCGATGGAAAGCGAGACNAAGTCGGGCCTCATTGAAGAACCATGTC
TGCCAGCAGCCTGATGACCAGGGGCGGTCG
Right flanking sequence : From position 2555600 (length bp)
TCCCCATCCGGCCATCCAAGCGGACATTTCGTCAGACATCCTCTCTGGTTTACACGCAGATAGTTACGCT
GTATAAAGCAGTTATGGACGCATCTTTCCC
Print the CRISPR sequence : From position bp To position bp