Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_022571_3                                                                                                                 top


Strain : Clostridium saccharobutylicum DSM 13864 RefSeq :NC_022571 (chromosome circular)
CRISPR id : NC_022571_3
DR consensus (30 bp) : GTTGAAGATTAACATTATATGTTTTGAAATNumber of repetitions :18
Begin Position : 2252450 End Position : 2253591

2252450GTTGAAGATTAACATTATATGTTTTGAAATAATAGAACTTGCTAAAAGGTTAGGAGTTGCTAAAAG 2252515
2252516GTTGAAGATTAACATTATATGTTTTGAAATAATTAAGTGATGAAAGAATAGAAGAAAAAGAAGTTG 2252581
2252582GTTGAAGATTAACATTATATGTTTTGAAATGAAGGTAATGAAAGCATTTCACTCAACTGACTAAA 2252646
2252647GTTGAAGATTAACATTATATGTTTTGAAATGCTAGTAATGAAGATGATGATGTAGACACTACTAA 2252711
2252712GTTGAAGATTAACATTATATGTTTTGAAATATAGGTGATAAGGATTATTCTATTTCTAGCAGTTGG 2252777
2252778GTTGAAGATTAACATTATATGTTTTGAAATTGTTTTCCATCCATTTCGTACTCATTCGAATTTA 2252841
2252842GTTGAAGATTAACATTATATGTTTTGAAATGAAACTTTTTCTTTTTTATTTTTAGATTTAACGCT 2252906
2252907GTTGAAGATTAACATTATATGTTTTGAAATAGAAATTTTATACACATAAGTTCATTCACTTCAAAT 2252972
2252973GTTGAAGATTAACATTATATGTTTTGAAATGATTTAATGGAAATTTAGATGAACTTTCTGTATTA 2253037
2253038GTTGAAGATTAACATTATATGTTTTGAAATACTAGTGAAACTGCCATCAATACTTACATTGAATTC 2253103
2253104GTTGAAGATTAACATTATATGTTTTGAAATTTAAATAATTATTAGAATTAGATATACTACTAGTTG 2253169
2253170GTTGAAGATTAACATTATATGTTTTGAAATGCAAATGGAACAGATGTACTTGATGAAGAATATGA 2253234
2253235GTTGAAGATTAACATTATATGTTTTGAAATGCACATTTATTCAAAACCATTTGTATAGCATTTTT 2253299
2253300GTCGAAGATTAACATTATATGTTTTGAAATTGACCTACTACGTTTTCATGACTCCCCACCATGAT 2253364
2253365GTTGAAGACTAACATTATATGTTTTGAAATAGTGCTGTAGACATTTCCCCAATTACTAAAAGAAT 2253429
2253430GTTGAAGATTAACATTATATGTTTTGAAATTTGTCTAATTTTTTTATTCCTGGTATTTCAGTTATT 2253495
2253496GTTGAAGATTAACATTATATGTTTTGAAATAAATTATAAGCATATACAAGTGTATTTGTTTTTCCT 2253561
2253562GTTGAAGATTAACATTATATGTTTTGAAAT2253591
Left flanking sequence : Till position 2252450 (length bp)
TATTTAATTTTATAAAATAGCTGGTAAAATAATATGCAAATGTAGGTGAATGGCTGGATTAAAAGATATT
AATATATATAGAAATGACTTATTTACTTTG
Right flanking sequence : From position 2253591 (length bp)
ATAGATACAGTCCAACTAATTTAATAAAAATAAAAAAGGAAGAAGAGAATTTATGTATTTTGAAAATATA
AAAATTATAGATATATCTACGTTATTAAAA
Print the CRISPR sequence : From position bp To position bp