Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_022786_6                                                                                                                 top


Strain : Candidatus Caldiarchaeum subterraneum RefSeq :NC_022786 (chromosome circular)
CRISPR id : NC_022786_6
DR consensus (26 bp) : CTTTCAATTCCCTCTCGCGGGATCAGNumber of repetitions :53
Begin Position : 1130820 End Position : 1134377

1130820ACCACAATTCCCTCTCGCGGGATCAGCCCGCATCCCGTCGTATCATACCGCCATAACAGCCATCAACGCCATA 1130892
1130893CTTTCAATTCCCTCTCGCGGGATCAGGAAGGCGAGGTGGTTGAGATGAAAGTAGTAGAGCTTCGGG 1130958
1130959CTTTCAATTCCCTCTCGCGGGATCAGATTAGAGTATTCAAGGACAAGGTTCTGCTTATGCTCAGGAG 1131025
1131026CTTTCAATTCCCTCTCGCGGGATCAGACGTATTACAGCCAATTCATGCCTGCTACTATCGTCAACAATCTA 1131096
1131097CTTTCAATTCCCTCTCGCGGGATCAGGCCGCTGTATCTCCTGCTTCCGTCTCTCCTCAAGGCTTATA 1131163
1131164CTTTCAATTCCCTCTCGCGGGATCAGAGAACTGTTGACGGACGGAGAGTTCGACGAATTCGAGA 1131227
1131228CTTTCAATTCCCTCTCGCGGGATCAGATGAGGGGGCAGCGAGGTTGTTGTCGTCTCTGTTAAATGT 1131293
1131294CTTTCAATTCCCTCTCGCGGGATCAGATGTCCACTATCATCTCTACGCCCGCATTGAGGACATCATGG 1131361
1131362CTTTCAATTCCCTCTCGCGGGATCAGCAGAAAAACACAGACTATACCACGAACCAGATTGTCCACGAGTTGT 1131433
1131434CTTTCAATTCCCTCTCGCGGGATCAGCTGGAGGCTACGCACTTTTCGACCATGATGGAGAACTATG 1131499
1131500CTTTCAATTCCCTCTCGCGGGATCAGTGCCTAAGTCAGGCAGCAGCAAAACAACACGTATCCACATCCAGGA 1131571
1131572CTTTCAATTCCCTCTCGCGGGATCAGAAAGTTTGAACGCATCAACCGCAAACTTGACAATATCTCAT 1131638
1131639CTTTCAATTCCCTCTCGCGGGATCAGATAATACTTAAGCATGGCAAAACATCACCAAAAAAATAGTTA 1131706
1131707CTTTCAATTCCCTCTCGCGGGATCAGAGATAGGTATTATCACGCCTCTAAAGTATCAACTTAATGC 1131772
1131773CTTTCAATTCCCTCTCGCGGGATCAGTTAGCAGCGGGTTGCGTGAGTTGTTGGAAGAGTTGCTAAGAG 1131840
1131841CTTTCAATTCCCTCTCGCGGGATCAGTGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG 1131902
1131903CTTTCAATTCCCTCTCGCGGGATCAGTGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG 1131964
1131965CTTTCAATTCCCTCTCGCGGGATCAGTTCAGAGATGTTCTCACCGATGAGGAGCAGGATTTGGTGA 1132030
1132031CTTTCAATTCCCTCTCGCGGGATCAGGACAGCGGCGGCTGCATTCAATAGAGTTGTGAAGAGCCGG 1132096
1132097CTTTCAATTCCCTCTCGCGGGATCAGTGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG 1132158
1132159CTTTCAATTCCCTCTCGCGGGATCAGTGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG 1132220
1132221CTTTCAATTCCCTCTCGCGGGATCAGTTCAGAGATGTTCTCACCGATGAGGAGCAGGATTTGGTGA 1132286
1132287CTTTCAATTCCCTCTCGCGGGATCAGGACAGCGGCGGCTGCATTCAATAGAGTTGTGAAGAGCCGG 1132352
1132353CTTTCAATTCCCTCTCGCGGGATCAGAACATTTTTTCCGCTTGTAAACGGGGTTGTGTGGCTGAGAA 1132419
1132420CTTTCAATTCCCTCTCGCGGGATCAGTCTGGCAATTCTAGACGCACCATTGTCACGTGGCTTGGGTCG 1132487
1132488CTTTCAATTCCCTCTCGCGGGATCAGTGGAAGAGAACATTCCACTACATCGGCGCAGAGCATAAGATTGT 1132557
1132558CTTTCAATTCCCTCTCGCGGGATCAGTGTAGTTGAGGAGTGCGGCTACTGCGGCAAATCACTCATATC 1132625
1132626CTTTCAATTCCCTCTCGCGGGATCAGGAGGCGTTTGACTGCAGCCTCAAGCTCACTCGGCAGATAAAGT 1132694
1132695CTTTCAATTCCCTCTCGCGGGATCAGCCGCTATAATTTTGATAGATGTTAGCGGCTCCGTTAGCGA 1132760
1132761CTTTCAATTCCCTCTCGCGGGATCAGTACGATCTTGATTCGGCAGAGCTGTTGACGCAGCGCGGCAGAA 1132829
1132830CTTTCAATTCCCTCTCGCGGGATCAGTGGATGGATTCCATTCTTTAACGCCGCCACAGGTAAAATACAGTTCTTGCGCGGCAGAA 1132914
1132915CTTTCAATTCCCTCTCGCGGGATCAGTGCGACGGTGAAGTTTCGTAGGGTGACGGTGGATGAGGCAA 1132981
1132982CTTTCAATTCCCTCTCGCGGGATCAGAAGCGAGGGCCCTCGCATAGGCGGAGAAAGAAGGTTGAGCAG 1133049
1133050CTTTCAATTCCCTCTCGCGGGATCAGAAGTGTAATCTCGAAGTCGGCGATTCGACGATTCAAGTCATTTA 1133119
1133120CTTTCAATTCCCTCTCGCGGGATCAGATGGGGGTGAAAGAAAAAATGAGTTACGATCTTGACTCGGCAAT 1133189
1133190CTTTCAATTCCCTCTCGCGGGATCAGTTTTCAAGGTCTTGTTTTTTTGTTCCGAAAACCATGGTAA 1133255
1133256CTTTCAATTCCCTCTCGCGGGATCAGCCTTGAAAAATCCTTGTCAAGCCCGCCTAGGCCCCTGCTAGGGCCCTAGC 1133331
1133332CTTTCAATTCCCTCTCGCGGGATCAGTTGCAAAAGAGAGTTGAGCGTCTAAACAAATTAATAGCAAATGT 1133401
1133402CTTTCAATTCCCTCTCGCGGGATCAGATATTAAAACGTTTTGTTTTTTGTGTTGTTATGGATAAAAT 1133468
1133469CTTTCAATTCCCTCTCGCGGGATCAGTCGCCTTTTTTAGTGCTTCGTCGCTCGGCAGGGGGCCGAAGT 1133536
1133537CTTTCAATTCCCTCTCGCGGGATCAGAGGCTGCTCAACCCAAAACAAGGAGCTGCTGCTGCAGACTT 1133603
1133604CTTTCAATTCCCTCTCGCGGGATCAGAGGAGTAATGGCGAAAAAGAAAGCCAAACTAACAATAGATACGA 1133673
1133674CTTTCAATTCCCTCTCGCGGGATCAGCCAAAACACTCGCTCACGCAGGCGTCCCAATCCTCACCTTGGA 1133742
1133743CTTTCAATTCCCTCTCGCGGGATCAGTAGGCATAGAAGCGGGGCAAAGATGCGGTTCACCATGAA 1133807
1133808CTTTCAATTCCCTCTCGCGGGATCAGAGCATTCTTTGAACATAGACGAGGTCTTTGCTGCTTTCATAAAGT 1133878
1133879CTTTCAATTCCCTCTCGCGGGATCAGGGGGTTATATACTTCGGTATTACGCTGGTCATATGGAATTGT 1133946
1133947CTTTCAATTCCCTCTCGCGGGATCAGTGTTTCGCAGCTCAGCCTGCACCATCAGCTCAGACCATTTA 1134013
1134014CTTTCAATTCCCTCTCGCGGGATCAGTCACAGCTTTCAATTCATCAAAATCATATGTCTTAAGATAATA 1134082
1134083CTTTCAATTCCCTCTCGCGGGATCAGAGCCTTTGCCTTTCGCACCTGCCTCATAATACACTGACCTCGC 1134151
1134152CTTTCAATTCCCTCTCGCGGGATCAGTGTTTCATACTCTGCGAGGCTGATGAGCCCCTCGCGCGCTTGA 1134220
1134221CTTTCAATTCCCTCTCGCGGGATCAGTTAGTCTCAGCTAAAGAGGCGGCTTTGTTATTGACATTCCTGA 1134289
1134290CTTTCAATTCCCTCTCGCGGGATCAGTCTGCACCAGTAGGCGGCAAATTCTTCAAAGCATCC 1134351
1134352CTTTCAATTCCCTCTCGCGGGATCAG1134377
Left flanking sequence : Till position 1130820 (length bp)
TGGCTAGGTGGATGGCGCCTGAGATGGAGACATGAGCCCCCAGAAGCATAGCTATCATTATTCAGACGAG
TTTTAATGATTTACTCCACCCCACATCCTC
Right flanking sequence : From position 1134377 (length bp)
TGTGCGTTTTTCATCAATTTTTTCCATTTTCGCGGCATTTTGTCGCCGCGTATCTTCAGGCAATAAATGT
TTAAGGGTAGTATTTAGGTTTATACCCCCT

Print the CRISPR sequence : From position bp To position bp