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CRISPRs details
NC_022786_6
Flanking alignement tool
Page manual
  
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NC_022786_6                                                                                                                 
top
Strain :
Candidatus Caldiarchaeum subterraneum
RefSeq :
NC_022786 (chromosome circular)
CRISPR id :
NC_022786_6
DR consensus (26 bp) :
CTTTCAATTCCCTCTCGCGGGATCAG
Number of repetitions :
53
Begin Position :
1130820
End Position :
1134377
1130820
ACCACAATTCCCTCTCGCGGGATCAG
CCCGCATCCCGTCGTATCATACCGCCATAACAGCCATCAACGCCATA
1130892
1130893
CTTTCAATTCCCTCTCGCGGGATCAG
GAAGGCGAGGTGGTTGAGATGAAAGTAGTAGAGCTTCGGG
1130958
1130959
CTTTCAATTCCCTCTCGCGGGATCAG
ATTAGAGTATTCAAGGACAAGGTTCTGCTTATGCTCAGGAG
1131025
1131026
CTTTCAATTCCCTCTCGCGGGATCAG
ACGTATTACAGCCAATTCATGCCTGCTACTATCGTCAACAATCTA
1131096
1131097
CTTTCAATTCCCTCTCGCGGGATCAG
GCCGCTGTATCTCCTGCTTCCGTCTCTCCTCAAGGCTTATA
1131163
1131164
CTTTCAATTCCCTCTCGCGGGATCAG
AGAACTGTTGACGGACGGAGAGTTCGACGAATTCGAGA
1131227
1131228
CTTTCAATTCCCTCTCGCGGGATCAG
ATGAGGGGGCAGCGAGGTTGTTGTCGTCTCTGTTAAATGT
1131293
1131294
CTTTCAATTCCCTCTCGCGGGATCAG
ATGTCCACTATCATCTCTACGCCCGCATTGAGGACATCATGG
1131361
1131362
CTTTCAATTCCCTCTCGCGGGATCAG
CAGAAAAACACAGACTATACCACGAACCAGATTGTCCACGAGTTGT
1131433
1131434
CTTTCAATTCCCTCTCGCGGGATCAG
CTGGAGGCTACGCACTTTTCGACCATGATGGAGAACTATG
1131499
1131500
CTTTCAATTCCCTCTCGCGGGATCAG
TGCCTAAGTCAGGCAGCAGCAAAACAACACGTATCCACATCCAGGA
1131571
1131572
CTTTCAATTCCCTCTCGCGGGATCAG
AAAGTTTGAACGCATCAACCGCAAACTTGACAATATCTCAT
1131638
1131639
CTTTCAATTCCCTCTCGCGGGATCAG
ATAATACTTAAGCATGGCAAAACATCACCAAAAAAATAGTTA
1131706
1131707
CTTTCAATTCCCTCTCGCGGGATCAG
AGATAGGTATTATCACGCCTCTAAAGTATCAACTTAATGC
1131772
1131773
CTTTCAATTCCCTCTCGCGGGATCAG
TTAGCAGCGGGTTGCGTGAGTTGTTGGAAGAGTTGCTAAGAG
1131840
1131841
CTTTCAATTCCCTCTCGCGGGATCAG
TGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG
1131902
1131903
CTTTCAATTCCCTCTCGCGGGATCAG
TGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG
1131964
1131965
CTTTCAATTCCCTCTCGCGGGATCAG
TTCAGAGATGTTCTCACCGATGAGGAGCAGGATTTGGTGA
1132030
1132031
CTTTCAATTCCCTCTCGCGGGATCAG
GACAGCGGCGGCTGCATTCAATAGAGTTGTGAAGAGCCGG
1132096
1132097
CTTTCAATTCCCTCTCGCGGGATCAG
TGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG
1132158
1132159
CTTTCAATTCCCTCTCGCGGGATCAG
TGGAATTGTAGGTAAAAATTATCTGCTGTTTCTGAG
1132220
1132221
CTTTCAATTCCCTCTCGCGGGATCAG
TTCAGAGATGTTCTCACCGATGAGGAGCAGGATTTGGTGA
1132286
1132287
CTTTCAATTCCCTCTCGCGGGATCAG
GACAGCGGCGGCTGCATTCAATAGAGTTGTGAAGAGCCGG
1132352
1132353
CTTTCAATTCCCTCTCGCGGGATCAG
AACATTTTTTCCGCTTGTAAACGGGGTTGTGTGGCTGAGAA
1132419
1132420
CTTTCAATTCCCTCTCGCGGGATCAG
TCTGGCAATTCTAGACGCACCATTGTCACGTGGCTTGGGTCG
1132487
1132488
CTTTCAATTCCCTCTCGCGGGATCAG
TGGAAGAGAACATTCCACTACATCGGCGCAGAGCATAAGATTGT
1132557
1132558
CTTTCAATTCCCTCTCGCGGGATCAG
TGTAGTTGAGGAGTGCGGCTACTGCGGCAAATCACTCATATC
1132625
1132626
CTTTCAATTCCCTCTCGCGGGATCAG
GAGGCGTTTGACTGCAGCCTCAAGCTCACTCGGCAGATAAAGT
1132694
1132695
CTTTCAATTCCCTCTCGCGGGATCAG
CCGCTATAATTTTGATAGATGTTAGCGGCTCCGTTAGCGA
1132760
1132761
CTTTCAATTCCCTCTCGCGGGATCAG
TACGATCTTGATTCGGCAGAGCTGTTGACGCAGCGCGGCAGAA
1132829
1132830
CTTTCAATTCCCTCTCGCGGGATCAG
TGGATGGATTCCATTCTTTAACGCCGCCACAGGTAAAATACAGTTCTTGCGCGGCAGAA
1132914
1132915
CTTTCAATTCCCTCTCGCGGGATCAG
TGCGACGGTGAAGTTTCGTAGGGTGACGGTGGATGAGGCAA
1132981
1132982
CTTTCAATTCCCTCTCGCGGGATCAG
AAGCGAGGGCCCTCGCATAGGCGGAGAAAGAAGGTTGAGCAG
1133049
1133050
CTTTCAATTCCCTCTCGCGGGATCAG
AAGTGTAATCTCGAAGTCGGCGATTCGACGATTCAAGTCATTTA
1133119
1133120
CTTTCAATTCCCTCTCGCGGGATCAG
ATGGGGGTGAAAGAAAAAATGAGTTACGATCTTGACTCGGCAAT
1133189
1133190
CTTTCAATTCCCTCTCGCGGGATCAG
TTTTCAAGGTCTTGTTTTTTTGTTCCGAAAACCATGGTAA
1133255
1133256
CTTTCAATTCCCTCTCGCGGGATCAG
CCTTGAAAAATCCTTGTCAAGCCCGCCTAGGCCCCTGCTAGGGCCCTAGC
1133331
1133332
CTTTCAATTCCCTCTCGCGGGATCAG
TTGCAAAAGAGAGTTGAGCGTCTAAACAAATTAATAGCAAATGT
1133401
1133402
CTTTCAATTCCCTCTCGCGGGATCAG
ATATTAAAACGTTTTGTTTTTTGTGTTGTTATGGATAAAAT
1133468
1133469
CTTTCAATTCCCTCTCGCGGGATCAG
TCGCCTTTTTTAGTGCTTCGTCGCTCGGCAGGGGGCCGAAGT
1133536
1133537
CTTTCAATTCCCTCTCGCGGGATCAG
AGGCTGCTCAACCCAAAACAAGGAGCTGCTGCTGCAGACTT
1133603
1133604
CTTTCAATTCCCTCTCGCGGGATCAG
AGGAGTAATGGCGAAAAAGAAAGCCAAACTAACAATAGATACGA
1133673
1133674
CTTTCAATTCCCTCTCGCGGGATCAG
CCAAAACACTCGCTCACGCAGGCGTCCCAATCCTCACCTTGGA
1133742
1133743
CTTTCAATTCCCTCTCGCGGGATCAG
TAGGCATAGAAGCGGGGCAAAGATGCGGTTCACCATGAA
1133807
1133808
CTTTCAATTCCCTCTCGCGGGATCAG
AGCATTCTTTGAACATAGACGAGGTCTTTGCTGCTTTCATAAAGT
1133878
1133879
CTTTCAATTCCCTCTCGCGGGATCAG
GGGGTTATATACTTCGGTATTACGCTGGTCATATGGAATTGT
1133946
1133947
CTTTCAATTCCCTCTCGCGGGATCAG
TGTTTCGCAGCTCAGCCTGCACCATCAGCTCAGACCATTTA
1134013
1134014
CTTTCAATTCCCTCTCGCGGGATCAG
TCACAGCTTTCAATTCATCAAAATCATATGTCTTAAGATAATA
1134082
1134083
CTTTCAATTCCCTCTCGCGGGATCAG
AGCCTTTGCCTTTCGCACCTGCCTCATAATACACTGACCTCGC
1134151
1134152
CTTTCAATTCCCTCTCGCGGGATCAG
TGTTTCATACTCTGCGAGGCTGATGAGCCCCTCGCGCGCTTGA
1134220
1134221
CTTTCAATTCCCTCTCGCGGGATCAG
TTAGTCTCAGCTAAAGAGGCGGCTTTGTTATTGACATTCCTGA
1134289
1134290
CTTTCAATTCCCTCTCGCGGGATCAG
TCTGCACCAGTAGGCGGCAAATTCTTCAAAGCATCC
1134351
1134352
CTTTCAATTCCCTCTCGCGGGATCAG
1134377
Left flanking sequence : Till position 1130820 (length
bp)
TGGCTAGGTGGATGGCGCCTGAGATGGAGACATGAGCCCCCAGAAGCATAGCTATCATTATTCAGACGAG
TTTTAATGATTTACTCCACCCCACATCCTC
Right flanking sequence : From position 1134377 (length
bp)
TGTGCGTTTTTCATCAATTTTTTCCATTTTCGCGGCATTTTGTCGCCGCGTATCTTCAGGCAATAAATGT
TTAAGGGTAGTATTTAGGTTTATACCCCCT
Print the CRISPR sequence : From position
bp To position
bp