Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_023035_4                                                                                                                 top


Strain : Spirochaeta sp. L21-RPul-D2 RefSeq :NC_023035 (chromosome circular)
CRISPR id : NC_023035_4
DR consensus (36 bp) : GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATNumber of repetitions :10
Begin Position : 1087226 End Position : 1087853

1087226GCTTACGCTTGAATCAGATCTTTGAAATGGTAGAATCTCTACTTGCCATCTGTCAATCATTTCTTT 1087291
1087292GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATAAATCTGGTGAAAAAAGTAGCCGGAAAGGA 1087357
1087358GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATGCGGAGGTAATAGTTATTAAGACCCAGATA 1087423
1087424GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATTTTTGGAAAGTATTCATAAATAGAGTCTTC 1087489
1087490GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATCAGGAATCAGTAAACCCATGTCTCCGGTAC 1087555
1087556GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATAAGGGGGAAATTTATGCCGATTAATGTTAA 1087621
1087622GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATCCTTGCCGTTGACGGAAGCACGACGACAC 1087686
1087687GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATTAATTATAATGATTATATAGGTGGTCCTA 1087751
1087752GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAATTTGGCTTTTTGAAAGGTTCCCCGGCCTTGC 1087817
1087818GTTGTGGCTTGAATCAGATCTTTGAAATGGTAGAAT1087853
Left flanking sequence : Till position 1087226 (length bp)
ACCAGAGATTGCCCTTTCTGGAAAATGGGAAGAATTACTGCCCTGGAACATTAAGGACGAACTCTTGGAA
ATGAAGTCGATTTTACAGGCTTAAATTTAC
Right flanking sequence : From position 1087853 (length bp)
ACATGGTTCGCAAACTACTTGGGCACAAAGAATTAAAGCTGATCCATTTCATTTTTTTTGGCAATTGCAT
TGAATTTTTATTAGTGTGATTGCCATTTTT
Print the CRISPR sequence : From position bp To position bp