Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_023134_1                                                                                                                 top


Strain : Paenibacillus larvae subsp. larvae DSM 25430 RefSeq :NC_023134 (chromosome circular)
CRISPR id : NC_023134_1
DR consensus (33 bp) : GTCGCATCCTACGCGGATGCGTGGATTGAAATANumber of repetitions :9
Begin Position : 1647332 End Position : 1647898

1647332GTCGCATCCTACGCGGATGCGTGGATTGAAATTTGTTTCGATGCTATATTTATACGCATCAATA 1647395
1647396GTCGCATCCTACGCGGATGCGTGGATTGAAATAAGGGAGGGGATTTTCAGACTCAGTTTAGACTATAC 1647463
1647464GTCGCATCCTACGCGGATGCGTGGATTGAAATATTACAGGGGCAGGGAGGTACAGAAGATAGGAGGTAC 1647532
1647533GTCGCATCCTACGCGGATGCGTGGATTGAAATACTAGAGCAATGAGCATTAACGGGATTCCAATCA 1647598
1647599GTCGCATCCTACGCGGATGCGTGGATTGAAATAAGGGAGGGGATTTTCAGACTCAGTTTAGACTATAC 1647666
1647667GTCGCATCCTACGCGGATGCGTGGATTGAAATATTACAGGGGCAGGGAGGTACAGAAGATAGGAGGTAC 1647735
1647736GTCGCATCCTACGCGGATGCGTGGATTGAAATACTAGAGCAATGAGCATTAACGGGATTCCAATCA 1647801
1647802GTCGCATCCTACGCGGATGCGTGGATTGAAATCAATTAAGCCGACCGCCATATAGCGTGGCTAT 1647865
1647866GTCGCATCCTACGCGAATAGTTGAATTGCAAAT1647898
Left flanking sequence : Till position 1647332 (length bp)
TAGGTATATTTGATTGTAATAAATTTGAATCAAAAAATCATTATTTGAATGATTTAATCAAAAAAATGTT
CAATTTTGATTGTTTTGTTCAAATTTCGCT
Right flanking sequence : From position 1647898 (length bp)
AAAAACTAGAGGCTTTGACCACTATCAACTGTGCCGTGCGATCGGACGGAACGACGCGAAAAGGCATCCT
ATTTTGTGAACTGCACCCTGTCAAGTAGAC
Print the CRISPR sequence : From position bp To position bp