Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AAQW01000001_2                                                                                                                 top


Strain : Pseudomonas aeruginosa PACS2 GCF_000168335 RefSeq :NZ_AAQW01000001 (chromosome circular)
CRISPR id : NZ_AAQW01000001_2
DR consensus (28 bp) : TTTCTTAGCTGCCTATACGGCAGTGAACNumber of repetitions :4
Begin Position : 3290147 End Position : 3290352

3290147TTTCTTGACGACCTATGTGGCAGTGAAATCGCCCTAAGCCCGCTTATGAACTTCGCGAC3290205
3290206ATTTTTTGCTGCCTATACGGCAGTGAACATGCAGCGATCCGGCCGGCGGAGCCGAAGGA3290264
3290265TTTCTTAGCTGCCTATACGGCAGTGAACGCTCGGTGTCGGCGTCCAACTCGGTGCTGGTG3290324
3290325TTTCTTAGCTGCCTATACGGCAGTGAAC3290352
Left flanking sequence : Till position 3290147 (length bp)
GCATGTCCGCAACGAAGTCCCATGGAAAGGGACTTCGTTTCGACTGGTGACCCCGGCCGACAGCGAACCG
CATCAATCGATACTTCAGGGCTGCTGGCCG
Right flanking sequence : From position 3290352 (length bp)
TAGACCCAAAAACCATCAACCTTCCAAGCTCCAAGGGCTCCCCCGGAAAAACCCTCTTTTTGCAGCGATC
TCTAACCCTTTGATCTAAAAGGGCTTTAAA
Print the CRISPR sequence : From position bp To position bp