Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_ABIZ01000001_8                                                                                                                 top


Strain : Verrucomicrobium spinosum DSM 4136 = JCM 18804 GCF_000172155 RefSeq :NZ_ABIZ01000001 (chromosome circular)
CRISPR id : NZ_ABIZ01000001_8
DR consensus (36 bp) : GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACNumber of repetitions :28
Begin Position : 5675573 End Position : 5677597

5675573CATTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCCGTGTGTGTGCTCAAGAAATCCGACTTTTCCCGT5675643
5675644GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCAATAAGGGTTTTTCCATTGCATCTCCTATTCTCAA5675715
5675716GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACTCCCATATTGATTACTATACCGCAAACTGCTTTGAACA5675789
5675790GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACGATAGATCTTGTTAACGCTGTCGCTCAGAGTGGACAA5675862
5675863GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACGTTGGTGAACCGATCCTTGGCCCCGTCTGATGGTTCCAG5675937
5675938GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACAACCGTTTTCGTCCCAAAATCCCGCCCCAACGGAATCAT5676012
5676013GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCGATTTTGTGAACGGTCACAATGCCGCGGTCATAATC5676085
5676086GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCCTTGCCGTTAGCTGGCGGTCGTGGTTTCTGTGTCAA5676158
5676159GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACGATATGTGGACTTGTATTTTCCGACCCTGCCAGAGCAG5676232
5676233GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACTCCTCTTCCGTGTACTCGTCTGTGAGCTGCTCTTTG5676304
5676305GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACTCAGCTCCAGCAGTTGCAGAAGGTCCGACTAAGGAGC5676377
5676378GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCTTGCTGGAGCGTCAGGTATCCGGGGCCGCGATCAACCGC5676453
5676454GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACGACCTAAAGGACGCTAAAGAGGCAGCGCTCGCCATTGC5676527
5676528GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCGGCTCCCCCGGCCAAACCTGCCAAGCCCGTGAAAGTGGA5676603
5676604GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACGAGCACGAGCACTCTCCCTGAACTTCGGAGATGTCACAAC5676679
5676680GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACAGGCAACGCGCCGGTCAAGCGGTGCCCGTGAACGGAAT5676753
5676754GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCCGGGTGCCCCTGGCGCTTGACCTTGCACACGGCAAC5676826
5676827GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACACGGAACAAGTTGACAATGCTCAACTTGCCATGGAGCA5676900
5676901GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACAACCCATAACTTTCCTTCCCTTCTATGGCTACCGTCA5676973
5676974GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCTCCCACCTGCGCCCCACTGGTGGGCCCTAGGTGCAG5677046
5677047GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACTCGAGGATCATCCCCTCACTCCACCACACAGCGCCCA5677119
5677120GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACATGCCGCGGCGCTGGGGGAGAAGGAAATAACAAGCCGT5677193
5677194GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCAGCGCCGGATCGACTTTTGCCCTTAGCTCCATGGCGC5677267
5677268GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACTGATAATGGCAAGGTATGTCCGGTTCCTAACCTCG5677338
5677339GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACAAAACTCACGAACGTCTCCAACATCTCCGCACCCATT5677411
5677412GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACCGTGATTTCGCCCTGAGCGTGGGTATGCGTCGAGGGTG5677485
5677486GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGACAGCTTCAGGTGCTGCCTACCTCCGTTGCGGATGCCGCAGA5677561
5677562GCTTCAACGAAGCCGCACCCTTTCGAGTGCGGAGAC5677597
Left flanking sequence : Till position 5675573 (length bp)
CCAGCGACGTCGCCTCCGGCATCTCAACTTCCCTGGATCACTGTTCCGATTTTAATCGGTTATTGACGCT
GTAGGGCAAGCGCACCGCTTGCCTCACTCG
Right flanking sequence : From position 5677597 (length bp)
GCCACCTCTGTAGGCCATTCAGCATCAAATTGCAAGAAGCTCATCTGCGAGCGGCACCCTGAATCAAACC
GGGAATCGGCGAACCCTCGCCGCTTTTCTG
Print the CRISPR sequence : From position bp To position bp