Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AFXK01000001_3                                                                                                                 top


Strain : Pseudomonas aeruginosa 213BR GCF_000223965 RefSeq :NZ_AFXK01000001 (chromosome circular)
CRISPR id : NZ_AFXK01000001_3
DR consensus (32 bp) : GTTTCAATCCACGCGCCCGTGCGGGGCGCGACNumber of repetitions :23
Begin Position : 5462581 End Position : 5464096

5462581CTTTCACTCCACGCGCCCGTGCGGGGCGCGACCACCTGGCCGGCGCATCCCGCCAGCGCGACCGT5462645
5462646GTTTCAATCCACGCACCCGTGCGGGGCGCGACACGGTTTTCTAGATTTTCAGTTATGAAACCTACC5462711
5462712GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCTTCCTCTAACGAGGGTGCGAAGAACGTGTAGCC5462777
5462778GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCAAGTGGGGATTCGTCTTCGACAATCTCAAGAAG5462843
5462844GTTTCAATCCACGCGCCCGTGCGGGGCGCGACAGGGTTCCGCAACAGCAGGAGCCATGAGCCGCT5462908
5462909GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCTATCTCCTTGACGACCGCCATGAAGAACGGATC5462974
5462975GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCTACCGGCGTTTTCGATCTGCGCACCGGCGAGGT5463040
5463041GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCCAGCTATATCGTCTCTTTCTTCGGCCTGACTTCGAGCGAACAGTCGTAGCCGAGCAAAA5463132
5463133GTTTCAATCCACGCGCCCGTGCGGGGCGCGACAGGGTGAAACTCTCTCCCAACGGGGATTTCGCGCT5463199
5463200GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGGAACAGTGTGGAAACTGGTTTCACTGGCGATA5463264
5463265GTTTCAATCCACGCGCCCGTGCGGGGCGCGACACGATGTGCGCTTTCGGGGTTTCGCGCAGCACGC5463330
5463331GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGGTCTGCAGCACCAGTTCGGCGCGGTGGCAGAT5463395
5463396GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCACCACAGCCAGGCCGCCGGCGGCCAGCCGCGCAA5463462
5463463GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGGTTCAAGGTGATCCTCCTCGGCCCGAAGGGCGTCCG5463531
5463532GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCGGTCACCGTCTTGACCTCGACGACCTCATAGTT5463597
5463598GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCAACCGCGTAGGCGAGCGCGTAGGACGGATCGA5463662
5463663GTTTCAATCCACGCGCCCGTGCGGGGCGCGACTGGGTCGGCCGGATTGCCGCGCAGCTCGCCCCAG5463728
5463729GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCACCCCCGCAGATGCTGCACCCAGAACCGTAATA5463794
5463795GTTTCAATCCACGCGCCCGTGCGGGGCGCGACTCGGCAAGGTCTTCAAGTCACGGCGCTTCGGCCT5463860
5463861GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGGCAGTGGTCTCTGCCTGCGTAGCGTCTGCGGCGAT5463928
5463929GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGCTTTCGGCCGGCTTCAAGCAGGCCTGCCAGGCAGC5463996
5463997GTTTCAATCCACGCGCCCGTGCGGGGCGCGACATGATGGGTCGCTCACGCAACTCCAGTGTGGCGGT5464063
5464064GTTTCAATCCACGCGCCCGTGCGGGGCGCGAC5464095
Left flanking sequence : Till position 5462581 (length bp)
TGGGGCCGCGACACCGTGACACAAGAGTTCCTGGCCAGACTCTGGGCCGGGAAGAGAGTGGCGAGACAAA
ATTTTTCAGGACAAACTCCCCAAAATCTAT
Right flanking sequence : From position 5464096 (length bp)
CAGCGGAGGTGAGACCGTCCAGCGTCTGCGTGGTGTCGGTACGGCTTCGTCGGCATGATCGGCTCCTTCA
TCGTGCGCAGCTACAACCAGGACGTCGACT
Print the CRISPR sequence : From position bp To position bp