Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AOOM01000229_1                                                                                                                 top


Strain : RefSeq :NZ_AOOM01000229 (chromosome linear)
CRISPR id : NZ_AOOM01000229_1
DR consensus ( bp) : Number of repetitions :1
Begin Position : End Position :

-1
Left flanking sequence : Till position (length bp)
GCCCGCGTGGGGCGCGACCACAGGTATCGGATGCCGTGGATGACGCTCTGCAGTTTCAATCCACGCGCCC
GCGTGGGGCGCGACGTCAAATTGGCGACACTAGTTTTGTGGATCCTTTGTTTCAATCCACGCGCCCGCGT
GGGGCGCGACGTCCACCACAAGTTGGGGAGCAAGTGATGGAATTGTTTCAATCCACGCGCCCGCGTGGGG
CGCGACCCGTGTCTTGAGTTATCGGTAGCTCTCGCGCGATAGTTTCAATCCACGCGCCCGCGTGGGGCGC
GACCTGCTACGATGGAATAAGGCCGGCGGCCGGGAGTGGTTTCAATCCACGCGCCCGCGTGGGGCGCGAC
GCAGGTCTTCCGATATGGTATCGGCAAGATACTTGTTTCAATCCACGCGCCCGCGTGGGGCGCGACGAGC
AGTTTGCTGCCGCATCTGTCGTGACTGCTGTTTCAATCCACGCGCCCGCGTGGGGCGCGACCAAAACGTA
CAAGTTGATTCATGCCCTCTGGGCTGTTTCAATCCACGCGCCCGCGTGGGGCGCGACGGCACTTAACGCA
ATCTACCCACCATTGCCGCAGGTTTCAATCCACGCGCCCGCGTGGGGCGCGACAATTTGGGCGTTACGAA
TTCGGCCGGAGCATCAGTTTCAATCCACGCGCCCGCGTGGGGCGCGACGGCCGGGATATTGTTTTCACGC
TCAAAGACGGACGTGTTTCAATCCACGCGCCCGCGTGGGGCGCGACGGGATGACCAGATGTATCCGCCGT
ACTCTGCGCTGTTTCAATCCACGCGCCCGCGTGGGGCGCGACACCGTGGACTTAAGCTAGTCACACAGCT
CCTGAGTTTCAATCCACGCGCCCGCGTGGGGCGCGACGATCAAGCATTGACGACAACCAACGCGCTATCA
TGTTTCAATCCACGCGCCCGCGTGGGGCGCGACGACGGCATCACGCATATGGGTCCGCCCGACATCAATG
TTTCAATCCACGCGCCCGCGTGGGGCGCGACTGCCTTGCGGGCAAGGCGCTTGTAGCATAGCGTCAGCGT
GGAGATAACGCCAACGTAATGTCTGCGAGAAGGAATTGGGGGGCGCAGTGATGGAGGGAAGAAATAAACC
ATTTATGATTCAATTGTATAAGGCTGCGCCAACCGGCCGGGAAAATGATGAGCACCGGGGGTTGGCGCAG
TGTTACACGATAAGGGTATCACCAAAAATATCCAGCGCCGGTTTGGCACCGTGGTGTTCAACTTTATCAC
GCCAGCCCTTGCCAAGGCGATAAAATCGCAGGCTGTCGACCCGTTCGTCGTAGGTGGTAAGCAGCTTCTG
ACGTAAAACCACCCACTGTGCAGCATCAACGTCGCATTCGAATACCGAGTATTGCACCCGAACACCATAG
TCCAGGCAGATTTTCGCCAGTTGCCGCAGGCGGCGCGGGCCGTTGGCGTCTTCCAGCGATACATCGTAAG
TGATGAGTACCATCATACAGGGGCTGCTCCGGTTGTCTGTTATCAGCGCAACACATACGGCGGATAGTGC
GCCAAATCGCCACGCAGATGGCGGGCCAGTAACATCGCCTGCATATGCGGTAAAAGCCCGATGGCGACTT
TTTCATTTAAAAACGGATGGGTTATCTCCTCTTGTTTCCTCGCTTGCCAGGCCTGCAATACCCGTTTGCG
CGCCTCATCTTTTAGCGTAACGCCGCCTAACAGGTCGGTGGTGAAATCCTGTATGGCGACTTGCTGGCGG
TTAATCAGCGTCAGTACCAGCCGGTCTACCAGCGGTGCGCGGAACTCTTCGAGCAGGTCCAGCGCCAGGC
TGTCGCGCCCCGGGCGTTCCTGATGTAAAAAACCGACTTGCGGGTCAAGGCCGACGCCCTGTAAAGCCCC
GCTGATCTCTTTGCTCAGTATCGCGTAGAAAAAAGAGAGCAACGCGTTGACCGGGTCTCGCGGCGGGCGA
CGTGAACGGCCATTAAAGCGCAGTTCACTGCGCGTAGCGATAAGCGAATCGAACACACCGAAATAGTGGC
TGGCGGCCTCACCCTCCAGCCCACGCAGGCGCTCGATATCCGTCTTCGCAGGAAGCTCGGCGACAATCTG
GCGCAGGCGGTCGGCCGCGGCCTGCAACGCCGGGTTGTCGCCATAGGTGCGTAGGTGACGTAAGAGAACG
CGGCGGGATGACTGGATTTTCGCGGTCAGAATATGGCGTGCCAGCGTCGTTGCCTGGGTGGTCGTAGCCT
GAAACTGGGCTCGTCGTAATAACACATTGCCACTTTGGCGGCCGACGACGCGCGCCAGAAAGCGACCGAA
TGGGTCGAAGAACGAAAGTTGGGTGCCGTTTTCGCCACAGAACCCCATTAATTGCGGTGACACCAGTACA
TTGCCGAAACAAAAAATATTGCCGACGGAGTGGATGGGCACTTGCAGCAGTTTCTGGCGCTGGCCGTCTA
CCGTTTGTTCAATCAGTAGCGTTTCACGCTCTTTATGCAGCCAGGCCCCGTCGCGGGTGATATACAGGCT
ATTCTGGAGTTTCTTCATCACGCTCCTCCATAAGGTAAAGTCGGCGAATATAGTCTCCGGAGCGGTCTGT
GTGTTGCAGTGACGGCTGACAGAGTTCATTGAGCGAGCAGGCAAGGCAGTGTTTACCGGGTGTGGCGTGC
GGGGTGTCGCCCTGTTGCAGCAGATGGCTGACGGCCGCAATCAACTGCCGGGTGTGGGTGCGCAGCGCGT
CATCAAGCTCAACGTCAAGGCGGCGGCGTGTTTCCCAGTACCATAATGCGCCGACGGGAATCGACCGCCC
GCTCATCTCTTCCAGCGCCAGCGCCTGCGCGCACAGTTGCACCTTATCTGCCTGATGGATTTTCGGCTTG
CCGCGTTTGTATTCCACCGGGGTCAGCGCCCCGGTGGCCAGTACCTGTTCGAGCAAATCCAGCTTACCGC
TCAGGCCCAGTTGCGGGGCCTGTACGATAACACCGCGCTCGTAACGAATGCCGCGCCGGGTTTCCGGCAG
GCCGTGGTCTACCCGCTGGTGTAACATCGTGCCTTGCGCCGTCAACCAGTTATCCGCCCATACCTGCTCA
GTGTGAATGAGTGCGCACTGACGCGGGCAGAAGGCGTAATGTTGCAGTGCCGAAATCGGCACCAGACGCG
CATCATCCATGATTTACTCCAGCAGGCGATGCAAGGTCACGCCAGCGGGCAGGGCGGCGTCATCCAGTGT
GACCTGGTAATCGCTATAGCGGCGCGCCGGGCCGTCGCTGGTGCGGGTGATGTGCAAACAGTCGAACAGC
TTACGTGCCGGTGCGTTGCCGAGCTCGCCCTCATGCTCGAAAACATACAGCGCACAGGCGTTCATTTCGC
CGCGTGCGGCGGATCTGTCATGCTCAAACATGTTGATCAACGCTTCCCACAGCAGCGCCAGATCGCTGTC
GCTAAAACCGGTCTGGCGTGCCAGATGGGCGGAAATATAGCCATGACAGCGGTACAAGCCATAAGGCACG
GTGTTTTTGCGCCCCATCGTGCGGTTGTCGCCATCCTGAGCCTGGGCTTCTTTTTCGGTCGCGACCGCAC
AGCGGGTAATGGTGTGTTCCAGCGCGACAATCGGATCAATAGAGCGTGAGAAGGTCAGTTGCACCGGGCC
GCGCACCTGGCCGCAGTTAACCCCGATCGACATCACCGCGCCGAAAGTGCGGACATCATAAAAGTTGCGG
CACATCCACTGGCGGGCCTCGTCTACCGCATCTCCGCCTTTGCGTTTTTTATCGCTGTTTAACGCCTCGC
TTTTGCCGATGCCTTCATAAGCGCGCTCGTGGGTTTTATTCAAAATCGCTTTTTCTTTGATGTAGATTTC
ATACGGCGGTTGTTCGTTGCGCGTCAGGCCGACGTAGTTGCGAATTTTGCGTTTCAGGCACACATCCGTC
ACCAGCCCCTGACCGGTTTCGGCATCCACGCGCGGCAGGTTGCCGGCATCCGGGTCGCCGTTGGGGTTGC
CGTCTTTTACATCAAACAACAGCACGAATTCATAGCGGTGGTTAAGGCTCATTGTTCATCTCCCTGACTG
GATGTGGATTGAGAAAAAAAGTGCTGACGTTGGTGGTAGTAGCCGATGGCAAACAGCCCTTGCTGCTCCT
GATTGAGGTGCGCCGGAAAATCGGTGATGTCGTCGATAATCTCGCCGATGCATTTCTGGTAACGGATTTG
CAGCGGGATTTTGAGCTTTTTCAGATGGTGGGTATGCAGCCGCATCAGCGTGTGGAACACCGCCACCGGG
GTGCTGCTGGCGCTGCTGTAATAGCGGTCGCAGAGGGTGGCGTTAATAGTCGGGCTGGCGGCGTGTTGTA
TTTGCTCAAGCGTCGCGAATAACCGGCCAAGCCGGTAGCCGACGCGCTGTTCTTCCGGGTCGAGAGACAC
AGAAACCTCCTTGATGGATTGACGACGAAAAGCCCGGTTGAGGCAGGCTTTCATCAGTGATGCTCGGTAA
TAACTGACGTCGCCCCGTTCGGCTTTGATGCGCTGTAACAGGGCGCTCATCAGGGCGGCGGGCAGCGGTT
GGCCGCTCAGAATGGCGCGCACCGTAGTGCCGGCCAGTAGCGGCGACAGGTTTTCTTCTTTGTTCAGCAA
TGCGCAGGCGCGTAATAGCGCTTTCAGCGGCGGGAAGGGGTACGTCACCGCTTTGGGTTTGATGATAGTG
ATATCGTCAAACCATTCACGGAGCCGTTCGGCGAATTGCGCCACCGTGCCTTCCTGAAAAAAGCGGATGG
CGATGCGCGCAGCATTCGGCGATAACCCCAGCAGGTAAAAGCGGGCCTCGCCGTCGTCTGCGCAGTAAGC
GCCGTTATGCACCGAGTCAAACAGTGCGGTAACGGTGCGCACGCCGTTGTCCGGGTCATCGCTGTTGCCG
AACAGCGTCGGTAGCCAGCTCTCTAGCGGGTGAGCCTGACTGGCCCAGCAGACGACCGAGGTTTCGCCAA
GCTGTAGCCGGTTCGGGCTGTGGGTTTGCAACAGGGCGTTCAGCGCCGTGGTGTATTCAAACGCCGCTTG
TTCGCTAATCGGGGCATTGGCTCCCTGTTCTTTGCCAAACGAGCGAAACGCATCCAGATTGAACGACACC
AGACTGGCGCCTGACGATTGTGCGCCCCACACGCCCTTGATGGACGGGTGCAGGGTGGCGACCGGCAGGC
TCGCGCCGCTCACCAGGCAGCGCCCCGTGGGTTCGTCGCTATCGGCAAGGACGTGCTGATACGCTGCCAG
TACCGCCGGGCGCTGGAAGACTAAACAGTCGGCATCCGTCACCAGCCGGAAGGTTAACAGCGGGTTGGCG
TCGTTGATTTCCACCCATAGCGGGTCTTGTTCCAGCTCGGGCTGCGGCAGGCCAGGGTAGCGTTGATAAA
ACGCCAGCACCGCCTGCAGGCCGCTATCCTGCGGGGCGAAGGTCGCCAGCGCTCGAATTCGATCAATAAA
GCAGGTTTTTTGTTGTTCGGTGCGCGTCGGGTTGCCTTTTTTATCGATGCCCAGCACATAGTCCGCCGGG
TCCCACAACAGGTTGGCGGCGACACCAGAGGTTTTTTTGATGCTTTTCGCCACGGTGAACAGGCGTGCCT
GCGGCTTTTTCCCTTGTGCCTCATCAAGATAACGGGTGTCTTCAAACTGCAAAAAGCGGCCGTCGCTGGC
AATAACAATCACAAACGGAATGGCTTTTTGCTCAAAGCCAAAGGCGGGCAGGGCGCTGTCGGGCTCCGTT
TGCCGCCGCTGGTAATACTGGCAGAGGGCGTGCAGGATCATGCGACCACCTCGGGGCTGTCCGGCGCAGG
AATGTCAATCACGCCCTGAGTCATTGCGGCATGGAAAAAACGCGGGGTCGGGTTCTGTGCCTGCTGGTAA
TCCATGTCGTAGAGCATCCAGCCGAGCTCACGGTCTTGTGCCAGTGCCGGTGGTTGCGGCGTGCCGTCGT
CAATCAGCAGCACATCGGCGGCAAATTCGCGGCAACCCAGATACGGTTGATTGATACATTGCCCTTTTTG
CGCCCGGCGGCGGAACATCTCGGCAAATTTCCCGGCGTTATCGCTGCGGCCTGCCTGGGCAGTCAGGGTG
AATTCGCCATGCAGACGATAGTGCACATCACGTAAAAACAGGCCGGCGCGTTGCTGGCGGTCATCTTCAA
TGTAGAGCCCTAACGTGCCGCTGCCCGCTTTCATCGTGCTGGTCACTACCCGGCTGGAGATAACCGAGCC
GACTTCGTTGCGCCGCAGGTTTATCCAGCGAATCGGGTTGATGACCTCAATACGTGTTACCCGCCAGGCG
ATGGCCGGTTTCCATAAAATAGCGTCAAAAATACTGCGTGCGGCCGAAGGGGTTATCACATCATAACTGA
CGCGCTCCACCTTCATTTCCGGGCGGGTAAAACACGCAAACTCGCCCTGCACATCCAGACAAAATGGCAT
AAAGCCTCCTGTTAAATCACTGAATCCTCAGCCGATAGCAGTGCCTCCGGCAGTTTTACACCGGTATTGC
GACAATAATGGCTCTCCAGTAGCACCAGCAGCCCGGCGCGGGGCTGTAATGCGCCAAGGGCTTGCAACCG
CGCCGCCAGCGTTTGCGGCACATTCACGCTATAGCGTTGCAATTTGCGATAGACCCAATGGGCACCGGCA
TCGCTTTCAAGGCATTGCAGCCAATACTCGACCGGGCTTGGTTCCTCGTCGTCCGGCTGCCAGGGCACAA
TGACCGCCACGCCGGTGTCGTCAATCAGGCGGAATTTCTCCGCCGCATCACGAAAACAGAGAGCCAGCCC
AATTTCTGAGTCGGGCTCTGCACGCAGCAGGCGGCCAATACCGTGACGGTCACGCTCGCCTTTACTGTTA
AAGCGGGTGAAGTAATCACGAAACGCCGCCGGGGAGAGCGGGTCGGTCAGCAGACCGGCATTGACCATCT
CCAGCGTACACTGGGCGGCCTGACGTAATGCACCGGCGGGCGGCAGTGCCGGCGGCATAAACACCTGCAC
GATACCGGGCCGGGTTAATTTCCCCTCGCGGTTGCAGCGACCGGCCGCCTGGGCGATGGCATCAAGCCCG
GCGATGGCTCGCCACACCGTTGGAAAATCGAGGTCGACGCCAGCTTCAACCAACTGGGTGCTGATAACCC
GTAACGGGCGGCTATCGCCCTGTTGACGCGCTGCCAGCCGCTGTTTTATCTGTGTAATCACCTGGCTGCG
ATGTTCCGCACACATTTGCGCAGAGAGATGCAAGACGTCCGGGTCATCGGCCAGTCGTTGATACAGCGTG
CGCGCATCGCCACGGGTGTTGACGATACACAGCACACAGGGTTGTGCGGCAAGTTCGGCGGCTAATGTTT
GCCAGTCGCAGGGTGTCAGCGAAAAGCGCACGTCAACCCGGCGCAGCACATCGGCAAGTTGCGACGGTCG
GGCGATGATTTCACGCACTTGCGCCAACCCCGGCATCAGTAATTGCCCAAACGGGTTGCGCTGGGCCTCC
AGCACCGGCTGTGTGGCGGTGCAGAGCAGCCAACTCACACCAAACAGTTCGGTGAGTTGCTGCATGACCT
GCGTAATTGGGGCGTGAAAGTCGCGCGGCAACTGCTGCGCCTCATCCAAAATGATGACGCTGTCAGCGAG
GTTGTGCAGTTTGCGGCAACGGCTTGGCCGTGCGGCATGGAGTGATTCGAACAACTGCACATTGGTGGTG
ACGATGACAGGCGCGTCCCAGTTTTCACATGCCAGCCGGGCGCGGGCATCATCACTGTTATCAAGATTGC
AGTGGTGCTCAATAACCGCCTCTTCCCCAAGAGCCTGACGGAACACGGCGGCGTTTTGCTCGATAATGCT
GGTGTAGGGTATGGCGTAAATAATGCGTTTTTTGCCGTGACGCAGGGCGTGATCGAGCGCAAAGCCGAGG
CTTGCCAGCGTCTTACCACCGCCGGTCGGCACCGTCAGGCTAAACAGACCGGGCGCAAGCGCCGCCGCCT
GCCGGGTCTCGTCAAGAATGGATTGGCGCAGCTGATGCAGCGGTGACTGTGGGTTACGGCCGGCAAGGGT
GTGCATATGGCTTTGATAGCGCGGCTGCAGCGATGCCAGTGTCAGCGATGCTGTTTTTTCGCGCCGCGCG
GCGTTCTCAGGCGACATATAGCGCTCGGTATCGAGAAAGTCGGCATCCACCAGGCAGGAGAACAGCATTC
GCAGCCATAGCGCGATGTTTTCTTCCGAGAGGGGCGGCAGGCTAACCGGTATTGCTTGCAAAATATCCGC
TGGAATCGCCTGTTCGCGAGCCTGCTGATACTCATCGTCACCGGTGGTTAAGCGATTATATAAAGAACCG
GCATCGCCTCTGCCATTGGGCAAACCGGCGTGATGACCGCTAATAGCGTAAGCCAGAATATGCCCAAGGC
CTTTGCCCAACGCGGTGATGGCATAGCGGGCACCGGCAATCGAGTGGCTTACGCGTCCGGGCGCTTGTTC
AATGTGGGCGTTTTCAGCGTCATAACCTGAGGCCTTACGCAAATAGTCCTGAAAAGGCGGGCGGTATTTA
CCCAGATCGTGCCATCGCCCGGCAAGCCTTGCCCAGTCCGATAATGCCGTGGGGGCAATGGCGGCGGCCA
ATTCTGCAACCTCCCGCAAATGTGCATCAAGATAATGGGGCGTGCTCCAGTCGCCATCGTTATTTCTTTT
GACATGCGCAATAAACGAAAGTCTTTCTGCCATATCGGCCTCTTAAATAGACGGGGTTATTATTTCACTC
GTCGTTAAGGTGAAGTAAATAATATATAACTCATTGTTTTAAATTGTTTTATTAAAAATTATTCATTTAG
AAATAATATCG
Right flanking sequence : From position (length bp)
GCCCGCGTGGGGCGCGACCACAGGTATCGGATGCCGTGGATGACGCTCTGCAGTTTCAATCCACGCGCCC
GCGTGGGGCGCGACGTCAAATTGGCGACAC
Print the CRISPR sequence : From position bp To position bp