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CRISPRs details
NZ_AP014510_1
Flanking alignement tool
Page manual
  
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NZ_AP014510_1                                                                                                                 
top
Strain :
Thermotoga profunda AZM34c06 GCF_000828675
RefSeq :
NZ_AP014510 (chromosome circular)
CRISPR id :
NZ_AP014510_1
DR consensus (30 bp) :
GTTTCCATTCCTCTTAGATTCGATTGAAAC
Number of repetitions :
89
Begin Position :
238239
End Position :
244124
238239
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TCGAAGAATGGAGAAAAATGGGTTTTAATGTAATCT
238304
238305
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTTTTATGAATTCCTTGGGTACAGTAGTCATTCATTT
238371
238372
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TATGTATAGTGCTTGCTCAGGATTCATTGTCTGTGTG
238438
238439
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AATGCTGGGTGTCCATGACAGCTGTGAGCCGTCCTT
238504
238505
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTTTGACTTTTTCGATCAACTCAGAGGGTAGAATTG
238570
238571
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GATTTTTGCAAAACGAAAACCATACCATGTGAAAGA
238636
238637
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ATTATGGAGTACAACAGAGAAATGGGTATTACTTTAT
238703
238704
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGGGTGCCCATGCACCCAAAAAGGAGGGAAATTTA
238769
238770
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGGGTGCATGAGCACCCAAAAAAAGGAGGGAATTTTA
238836
238837
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CAGTTCTTCCACCATGATATGCATTTCTTTCTAATT
238902
238903
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GGGGGTGAGATTAATAAGAACAGAGAAAGGAACAC
238967
238968
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTACACGTTTGACTATTGACATGTAACAAATATCAAA
239034
239035
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTACCACGAATCGACGGTGCTATTGAGTTGAATTC
239099
239100
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TCAGAGGTCTTTATAAGCACTTCAAAGTGCCAGTTGT
239166
239167
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AGATTCTCCACGCTTTGCTCATACACAGCAAGCAAC
239232
239233
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGAAGGTAATCACGAAGCGAGAACGAGGAAGCAGGT
239299
239300
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CCCGCTTTTACTGTTTCAGTACCACTTGCAATCAGT
239365
239366
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGCATCCGAAGCAATGCAACCATTATTCGATGCGT
239431
239432
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GATGCCTCAACTAAAAAAGATGCACTTATAAAACTCA
239498
239499
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGAAGGGTATGGCATTCAGCCCAATCCTAACACATA
239565
239566
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CATTGATCGAAAGAATTGCTGCTCTGGAAACGAAAGT
239632
239633
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CGTTTCTCGTACTATGCTTGAATTACCACGAATCGA
239698
239699
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CAGGCCTTTTTGCTTAGTGAGGTGAGAACAATGCCTT
239765
239766
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CCAACTGCAGAATTTCAGGATCATCCGTTTCTACCA
239831
239832
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGCAAAACGCTCACCAAGATCGGCAATGGTCTTTAA
239898
239899
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TCTCGACTATCTTCATCATCTTGTGAAAGCTCATTA
239964
239965
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CGGTGAAGATCATGACGAATCAGGATTCAGGATTGT
240030
240031
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GAAAAAGAAAAGCCCGCATCAAAGCGGGCATATCTCG
240097
240098
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ACAATTCAGCGTCAAGTACAGACTTAGCCTTACTACA
240164
240165
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CAAAATTGTAGCCACTATTCCTGCAAACTCGGACTGGA
240232
240233
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AATTAGAAGCAGGAAAGAGACAACCATCGCTCCGAT
240298
240299
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTGCCAAAGAAGTCTGTTTATTTCTGTTATCTTATC
240364
240365
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AAAGTACTCCTGCACCGAAAGTAAAAGTTTCGCCAGA
240431
240432
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTGGCAAGGAACGCTGGGTATACAGTAATGTTTTGA
240497
240498
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GGTGGAGTGTATGTTAAAGGTTATTGGTGAGAGTTT
240563
240564
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTTAGTGCATTAAGTGTTGCGTTTGTAGTGAACTGGA
240630
240631
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GGTTGAGAAAGACAGATCCTGAAGCCTGCAAAATCCT
240697
240698
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTTGGTTGACGAAGCAAACATATGGTTTAGTTCTCG
240763
240764
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GGGGTTCGTATTATCCAGACGCTTTAGTTCGTGTATA
240830
240831
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTATGTTGTGCCCACCAATTCAGCAAATCTTTGTCCCT
240898
240899
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AATGCATCAACAAGTTGTGCACCTTTTATAGTTATG
240964
240965
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ATCTATGCTTAAATGTGGCTTTAAAATTATTACACACG
241032
241033
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CAACACCACTCATGTCAACATTTACATTTAATGTATC
241099
241100
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AAGAAATTTACATGATTTTCTGATTATTTGTAATAG
241165
241166
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CACTTGATCTTGCACTTGTTGGGGTCAAGAAAATAATC
241233
241234
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGTTCTTGCGAACGCGAAATAGTTATGAAAAGTGTGTA
241301
241302
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CGTGTGAAGGCTGGTTTATCATCAGCCCTGAGTCGAT
241368
241369
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGGCTTCCAGGGTGGAAGGAAGCAACAGAAAATTGG
241434
241435
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTCTGTATCACAATAATATACATTTTGCCATCCTGTTTC
241503
241504
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTATCGGATTTGGAAAGAGCAGATCGAGCTCGAACAG
241570
241571
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGTCTTTAGTCTCGGTAGATGTCGAATTGTTCACAA
241636
241637
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTCCTTCGCAAAACTGCATTTTCTGGTATTAAAGTT
241702
241703
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ACTAAAGAACGGCTCACAGTCATGGACACCCAGCAT
241768
241769
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CAATTCAATATCTGCTCTAAGAACGTTTGCATTGTA
241834
241835
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTGAGCAACACGCTTGAAAAGATACCTTACGATGTTC
241901
241902
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGTGACGGGAGCAGAACTATCATCAGGAGTGAGAACT
241968
241969
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGAGTTGTTTGAGATGAAAAAGCAAGTCTTGATCCG
242034
242035
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGGTTGTGTTGGTGTTTTGCCTTTCAAGCGTGACTC
242101
242102
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGCCAATCTTCGTGCACTCATGCCTGTTTGAACCGA
242167
242168
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTGGTGATCGTTTCAAGATGCGATTTTTTGACTCAT
242233
242234
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ATGGTGAATGGAAAATTTCTTGCGCAGGACTTCTGG
242299
242300
GTTTCCATTCCTCTTAGATTCGATTGAAAC
AAGTTTGTTTTTGAACAGCAAGCGGTATCGAATCTCT
242366
242367
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ACGATGTTGACAAAGCCCAAGCAAATGTAAATGTCA
242432
242433
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CCTGCGGCAGACAAAACACGTTCATACTCTTCAACCAG
242500
242501
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CCTGCGGCAGACAAAACACGTTCATACTCTTCAACCAG
242568
242569
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ATTTTCCATTCACCATCGACGTATTTTTTGTAAGGA
242634
242635
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGTAAGGATAACGCTTGTTTTCAGAATCCAAGAAAG
242700
242701
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTGATGGGGGGGTTTAACCTCCCCGTTTTGAAAGGAG
242767
242768
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TCAGCCACTCTATATCACCTTCAAAACCGTTGTAAGA
242834
242835
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GCCTGATAGTACTCTTACCTGTGATCTTGGCTCTCT
242900
242901
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTCTCATCGCGTTGAATCGCTGTTTTTTCTGTATATAT
242968
242969
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTTTTTCTTCTGGAGAGTTGTTTATCAGCAACGAGA
243034
243035
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CCAAATGCGAGCGCTAAATTATCGGGAGTTGCATCGAG
243102
243103
GTTTCCATTCCTCTTAGATTCGATTGAAAC
ATGGTAGATGTGATATGCCAGATCATCTCGTTGCTGA
243169
243170
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TTGTTGGTATTTACAGAGTAATCACGTCTGAAAAGA
243235
243236
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GCAAGTTGTTCGCTTGCGGTTTAGGTTGCTCAGTTT
243301
243302
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTCTTTCAGAACGTTGCTGATTCTTCATTTCATCAA
243367
243368
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GCGTTAGAAGATTATAAAAAGGAGATGTGGCAAAAGA
243434
243435
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTTATAAGCGTCGTGAGGATAACCTTACGACGCTTT
243500
243501
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GTATGGTTTCTGATTTAACGGTAACTGGTTTCTTGT
243566
243567
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TAAGTAGTAAGAGTGAGATATACTTCTTCATCAACA
243632
243633
GTTTCCATTCCTCTTAGATTCGATTGAAAC
CTTGAAGACAAAGACATTATGCATGTTGAGGTTACTT
243699
243700
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GCTTTCCACCAACAGTCTCTTCACGTGATTCAGGGA
243765
243766
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGCAATTGAATGTGTAAATCTTGTTGTTGAAGAAAT
243831
243832
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TATTATAAATCTTTCAAAACTGCAGAGCGTAGAAT
243896
243897
GTTTCCATTCCTCTTAGATTCGATTGAAAC
GAGGTGCCTTTATGAACACATATTTGAAGTATTCGT
243962
243963
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGATTATGAGTGTATTGTATTAAATAGATTGAAAGG
244028
244029
GTTTCCATTCCTCTTAGATTCGATTGAAAC
TGAGAATCAATCTGTTTATAGTCAAATACTTCTCCT
244094
244095
GTTTCCATTCCTCTTAGATTCGATTGAAAC
244124
Left flanking sequence : Till position 238239 (length
bp)
AATGAAAATGGTGAAGTTTTGGAAATGGCTTTCGATTGGTATGATTTAACAGATTCACTATATGAGGAAT
CTGAAATATTTGTTCGGTTTGTTTCCAGCC
Right flanking sequence : From position 244124 (length
bp)
TCATATTATTCTTAATAGAATATTATCATAAGATTTTATATTTGTCAAAATTAGCTTTGCTACGGGGAAT
AGAATAAAACTAATACCTTAGTGAATTCAG
Print the CRISPR sequence : From position
bp To position
bp