CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_AP014510_2
Flanking alignement tool
Page manual
  
Home Page
NZ_AP014510_2                                                                                                                 
top
Strain :
Thermotoga profunda AZM34c06 GCF_000828675
RefSeq :
NZ_AP014510 (chromosome circular)
CRISPR id :
NZ_AP014510_2
DR consensus (36 bp) :
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
Number of repetitions :
39
Begin Position :
263499
End Position :
266414
263499
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CAACTTTACTTGTTCGTAAAGGAAAGATACCCCAAGCAGAA
263575
263576
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TATGGGAAGTTGAAAGTTGTGCAATTTACTTTAACGGACA
263651
263652
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GGGATGACGATTAACCAACTGTATATGTTCTTAAAGACAC
263727
263728
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GATTATAACACAAATATTAAACAGCGGGGACAGTTAATCC
263803
263804
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATCCGAGCAAATTTTTAACAACATCACAATCACAATATCT
263879
263880
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TCGTATACGTGTTCAACGAAGCAACATACCAATTAGTCAA
263955
263956
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TTTCCGGTTTCAGTCAGTGTAATCATCGAGCCATATAACA
264031
264032
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATATTTTATTTTATCGGTAGTAACGTGTTTAGCCCCCATGA
264108
264109
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CGTATACATATTCAACGAGGCAACCTACCAGTTAGTCAAGAA
264186
264187
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
AATTCCTGATTCGTATGGCGAAGTACTACGGGGTCTATTG
264262
264263
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GCGCAAAAACTTCTTTTCCTAGTAACAAATGACATCGAA
264337
264338
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TTTCTAATACGTATGGCGAAGTACTACGGGGTCTATTGAC
264413
264414
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TACAAAAAAGACAGCAAGGTCTTCTTTCAGATTTCCAAG
264488
264489
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
AGTACTACGGGGTCTATTGACCCCGTAGGCTTCGCTTAA
264563
264564
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATTTGTTTCTCAAACAGCGATATCCTAAGCAAAAGAAGG
264638
264639
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GGGGTGGCCGGAATGACGTTGCAACAATTGTACTCATTTCTA
264716
264717
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CTCTTGAAACAGAAGTACCCGAAGATCAAAAAAGA
264787
264788
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TGTTAAGTATTATTGTTAGAAGGTATGAAGGTGAGACAAT
264863
264864
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATAAAGCACAATTTGTTATATCAACAAACAGTGACTTTAAG
264940
264941
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ACAATTTCTTGAGAACAAAATACCCCAAGGTCAAAAGAGA
265016
265017
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CTCTTGAAACAGAAGTACCCGAAGATCAAAAAAGA
265087
265088
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TGTTAAGTATTATTGTTAGAAGGTATGAAGGTGAGACAAT
265163
265164
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATAAAGCACAATTTGTTATATCAACAAACAGTGACTTTAAG
265240
265241
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ACAATTTCTTGAGAACAAAATACCCCAAGGTCAAAAGAGA
265316
265317
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TGTCGAGATCAACACCAGCACAGAAGCTTTTGTATCTGGTAA
265394
265395
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GTGTGGCAACGGCGTCTGTGTCGTTGGTCACTAG
265464
265465
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GGTGAGACGTATATCGAAAGAAGACGCAGCTTCGTTGTTG
265540
265541
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
AATTTTTGAACTCGACCAGCGACGATGGCTGGTCGAGTA
265615
265616
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TCAGAAGCTTTTGTATTTGGTCACGAATAACGTCGAAGCC
265691
265692
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GGTTAAGCAAATTCAAGGGCGAAGGATATACGCTAACTCT
265767
265768
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CGTTGAGCGTCCCGGACAACATTGCCGTAGTAATGATAAA
265843
265844
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TGGTCGAGCTTGTGCGCGTGGGGCGCCGTTTTCGCCCCAC
265919
265920
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GGCTGGTCGAGCTCGTGCGCGTGGGGCGCCGTTTTCGTCC
265995
265996
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATCACTTTCTAAGACAGAGATTCCCGAAAAGGAAGGTAGA
266071
266072
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TCGCTATACTGAAAGAAAAAGCCGCAGCAAGAAAACTCGGC
266148
266149
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ACCCAAAGAGAAAAGTAGACCCAGAAACAGAAAAAGTTCT
266224
266225
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TATAGTTGCTATCATAGTAATCATTCTAATTCTGTTTAAAA
266301
266302
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATGAAAAATAAACCATCTTCTAAACGCAAAGAAATTATGAG
266378
266379
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
266414
Left flanking sequence : Till position 263499 (length
bp)
AATTTTTCCAATATAGAAAAAATGTACACCTCACATAAGAACAAAGGGAAAGAAAGTCCGCAAACCGAAC
AGTAACTCGCACCCAAACCCATCAGAGTTA
Right flanking sequence : From position 266414 (length
bp)
AGTACATTTCTAAGTATATCATAAGTAAAGGACTATTTGTGCTTAAAATTCATAACCTGGTGTTAATAAT
GTTAGTGCATGTCTAACATCAACCCTTTTT
Print the CRISPR sequence : From position
bp To position
bp