Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AP014658_4                                                                                                                 top


Strain : Bifidobacterium longum GCF_000829295 RefSeq :NZ_AP014658 (chromosome circular)
CRISPR id : NZ_AP014658_4
DR consensus (36 bp) : GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGNumber of repetitions :34
Begin Position : 1736132 End Position : 1738286

1736132ATTCAAAATTAGCATTCACCCTTCTTGATAAGCTTGTGATCATCACCATCGCACCCGAACAATA1736195
1736196GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGCACCAAACCTCTTGGAACACATCGACGA1736259
1736260GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGATCTTGAAATACTTGCGTTGCACGTCCT1736323
1736324GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGTTTGCAGGAACGGAATCTGCACTTCTA1736387
1736388GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTACTGCGACCAATGCGGCACGGAAACCA1736451
1736452GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGAATCAGGTTTGATACGGTTCCCCTCAACA1736516
1736517GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTCAATGAGCATGTCCACCTTGTTACCCG1736580
1736581GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGTTTGTTTTTGTTGTTGGCTACACCATA1736644
1736645GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGCCACCTACAAGCACAGTACGCGCAAGGG1736709
1736710GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGTTTGTTTTTGTTGTTGGCTACACCATA1736773
1736774GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTTGACTCGTTCTCGTGCGGCGGCGAGGCG1736838
1736839GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGATGTGCTGGAAAGTTGACGCGGAATTGA1736902
1736903GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGCTTAGTTGTTGAGTTCGGCCCACACTTGG1736967
1736968GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGCCGATTACGTCCGTGTGCTGGAGAAAA1737031
1737032GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGAAGGTGCCGAAGGTGAAGAAGCCACAG1737095
1737096GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTTTGACAACTTGTTTAACAAGGTTTACG1737159
1737160GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGCCACCTACAAGCACAGTACGCGCAAGGG1737224
1737225GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGGACACTCGCGCCTACGCGTCGAACTGG1737288
1737289GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGCATCGCAGCACCTACCTCCGTTGGGCCG1737352
1737353GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTGAGCAACAGGAAACTCGTCAGCGTACA1737416
1737417GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGAAGCGGTCTTGCACGAAATGCAGGACA1737480
1737481GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGAGAGGGGATATTCGACATCGTATGCAA1737544
1737545GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGATCATCGTGAAAGGCACACCAAATGACT1737608
1737609GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTTCGCGGGCACTTCTACAGTTTCCGCGT1737672
1737673GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGCGACACCACCACCGGCGTATCCCTAACGA1737737
1737738GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTATCTGCCGGTCCGTCACTGTTGTATGG1737801
1737802GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGGCGCAGGCAACAACAACGGCATCGCCTA1737865
1737866GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGAACAGGCCGGCGAATACGCCACCAAACA1737929
1737930GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGACACAACTTGATTACAGTGTTCGGAGTCC1737994
1737995GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTCGGGTCGTATGTGACGTCGCCATGCAC1738058
1738059GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTCGTGTAGTTGCCCATCACGTCGGTAGA1738122
1738123GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTGTATTGCGGTTTTCGCTTTATCATTTG1738186
1738187GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTGTTAGTTATCCACAGGATTATACACTTAT1738250
1738251GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTG1738286
Left flanking sequence : Till position 1736132 (length bp)
GCCGCAATCCGCGCCGCAACCTCTGCCGCCAACCGCGCAAGGGCCATTCCCGCAGCGGCCATCACAGCTA
AATCAGCCAAATCAACCCAAGCATTCCAGC
Right flanking sequence : From position 1738286 (length bp)
ATAGCCTATCAAGAAGGGCTATTTTTCAATCTTTTCAGACTCTCCTACGTTCAAAAAAGCGTGAGAAAGT
CAGGCGTTTCTTCCTCAATCTCACGTTTTC
Print the CRISPR sequence : From position bp To position bp