Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AP017296_2                                                                                                                 top


Strain : Nostoc sp. NIES-3756 GCF_001548375 RefSeq :NZ_AP017296 (plasmid pNOS3756_1 c)
CRISPR id : NZ_AP017296_2
DR consensus (37 bp) : GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAACNumber of repetitions :8
Begin Position : 103855 End Position : 104418

103855GTTTCAGTCCCCGTTAGGGGATTTGGCTTATGGAAACATAGTAATGATCCATCGCAAGGTGAAGCGCCATCCGATGT103931
103932GTTTCAGTCCCCGTTAGGGGATTTGGCTTATGGAAACCTTGATATCTTTTAGATTTTTGATATCAATTGCTGTAA104006
104007GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAACCTTACCTACAAAAATTAGACAAACTAGCGGACAAAGTAGAT104084
104085GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAACGCCATGTTCATATCAAAAAGACAGTGTAGGCGTAACCGT104160
104161GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAACTCTATACTTCAAAATGTAGCTTCCTAGATTTTG104230
104231GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAACTCTAACAATTGGCTTTTGCGGACACCCAGACGAAA104302
104303GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAACAAAGCCTCAAGCCAGGCGCATACATCCGCAAAGCCCGTTAGG104381
104382GTTTCAGTCCCCGTTAGGGGATGTGGGTTATGGAAAC104418
Left flanking sequence : Till position 103855 (length bp)
ACTTTTGTAAATCCCATCTTTTGCGTGTTTTAATCCCTTTGCGGGGTAATAAGGCTTATAAACTTTTGGT
CATAGCAGGTTTTTCAGGAGTTGGTAAGGA
Right flanking sequence : From position 104418 (length bp)
CGCTCCGTGCTGAAACTTATACAGAGCAAGCTTCCTGGGAAGCATTTTGACGGATCAAAAATTTAGTCCA
TTTTCAGCCGCTCTTATTGCAAGTAATTTG
Print the CRISPR sequence : From position bp To position bp