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CRISPRs details
NZ_AP017367_26
Flanking alignement tool
Page manual
  
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NZ_AP017367_26                                                                                                                 
top
Strain :
Leptolyngbya sp. O-77 GCF_001548395
RefSeq :
NZ_AP017367 (chromosome circular)
CRISPR id :
NZ_AP017367_26
DR consensus (34 bp) :
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
Number of repetitions :
114
Begin Position :
5307637
End Position :
5315948
5307637
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CAGACTTTGCTTGTACAAAAGGCATATGTTTTTTTA
5307706
5307707
CTTTCATCCCATTTCCCCGCAAGGGGGACGGAAA
CAATTTAGCCTATTGTAGGCTAAATACTACGTTTTTATA
5307779
5307780
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CAGCAGTGAGAAATTATTACGCTCGTTCTGATAGGTTAAAAC
5307855
5307856
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCCCGTAGCGCTTGGCTTTTGCTGATGTGTCCGCAGAAGACG
5307931
5307932
CTTTCATCCCATTTCCCCCGCAAGGGGACGGAAA
CGTTTGTGGCGACGGATTCTTGAAAGCTAATCCTTGCGACG
5308006
5308007
CTTTCATCCCATTTCCCCCGCAAGGGGACGGAAA
CAATTCGGGCGATCGCTTGCTGCATAGCGATACTTCAA
5308078
5308079
CTTTCATCCCATTTCCCCCGCAAGGGGGACGGAA
ACCTGAGCGCGTTACCGATCTTGGCGATCCATTGCCCCAAA
5308153
5308154
CTTTCATCCCATTTTCCCCGCAAGGGGACGGAAA
CACACGCGGCTAATGCAGGAACGCGAAGCAATCATCCGG
5308226
5308227
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TATCAGCGCCTCCCGGTTGCGCGTCCTACCCGCAGCCCA
5308299
5308300
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CACCCAATGGATCGATCTGTCTGGCGAATGGGCAGCGGGTGTCGT
5308378
5308379
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GTGGCGACGGGTGACCCCCCTATCGGGCTGCCACGCCAAA
5308452
5308453
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ATCTTGCGGCTGCCCCGCACAATGTTGAGTCCGT
5308520
5308521
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGCGACGTGCTTCGGTGGGCGATCGCCGGGCTAGA
5308589
5308590
CTTTCATCCCATTTCCCCGCAAGGGGGACGGAAA
CGAGGAACGGATCGAGGATGCCACCGATTGTGACTGTCCCCGA
5308666
5308667
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GAAAAGGAAGTAGCTACTTGCCGAAAAAAGCCAGGCAATTG
5308741
5308742
CTTTCATCCCATTTCCCCCGCAAGGGGGACGGAA
ACTCATCTCCTCCTTCTCCTCCAGTTCCTCCTGAAGGA
5308813
5308814
CTTTCATCCCATTTCCCCCGCAAGGGGACGGAAA
CTTGGACGTAGACGGCCCAATCGTTTCTGCCAAC
5308881
5308882
TTTCATCCCCATTTCCCCGCAAGGGGGACGGAAA
CTCCGTTTGGGGTGTAGGGCGCGGGAAGAGGGTTATAGA
5308954
5308955
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTCGTCGATTGGTTCCTGGCGATGCCGCTGGTGCGGTTTGCGA
5309031
5309032
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCCAGGGGGACAAAAAAGCGGCAGTCAGATTGTTTATG
5309103
5309104
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCGATCCAGGTGGCAGGCGAACCCTATCCCGGCCCCCATTA
5309178
5309179
CTTTCATCCCATTTCCCCCGCAAGGGGACGGAAA
CGTAGCGCAACTTGAATTGCCGCACGTAGCCCTTCCCC
5309250
5309251
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTGGAAACCAGTCTGCTAGGTGTGGCTGTATTCT
5309318
5309319
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GTGCGTAAGCGGTCATGCGGTACGCAAACGGAGGGACTT
5309391
5309392
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GTCGGAGCAAAGTTTCCCTCCCACCCGAACTGTACG
5309461
5309462
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GAGCCTCCTCCTCCACCTGTCAACTTTAACTGTA
5309529
5309530
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ATCAAGGCAGTGAGTCAACGCAGGCATAATTACA
5309597
5309598
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTACGTGTCTCGTCCGCTTGGGGCTGGAAAACGA
5309665
5309666
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTGTACACAGACTGTATGGACTGTGTTCATTCAAGC
5309735
5309736
CTTTCATCCCATTTCCCCCGCAAGGGGACGGAAA
CCTGGATACCTGTTGGGGAGTTGCGTACCCGGATTCTCTCG
5309810
5309811
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTTCGGGAACGTAAGCAGAAATCATGATGCAGACCTGATAA
5309885
5309886
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCTTCTGTGGGTGGGCCAACGCGGCAAAAGTCAT
5309953
5309954
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTGAAGTGTCTCTAGATGCTGCGACAGTAGCCCTGCTAGATGC
5310030
5310031
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GAGTCAGGCTGTCTGACTCGTGACGCATAAGGCGAAAATTA
5310105
5310106
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CGGAATGTTGCGGTCATCAATTCGCCAGGATCTCTCTTGGG
5310180
5310181
CTTTCATCCCATTTCCCCCGCAAGGGGACGGAAA
CTTCCGTCCTTCCCGTCCCCACGTTGCCATCATATAGA
5310252
5310253
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCCCAGTGTCGAGAGTTTCTGGGTGAGGCTCTCAAGTTG
5310325
5310326
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTATGGGCATATCTGCTGAGATTGTGCCCTACT
5310393
5310394
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTTATAGGTCAATTGTCGGGCTAATTGGAGTACT
5310462
5310463
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGGGTATTTGGCGGCAATCCAAATCTAGTCAACAGCCC
5310534
5310535
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTCCGTGAAAGCTGTATCGTTTGATCAAGCTTCCCGCGAGG
5310609
5310610
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCTTTGCGTTCCTTAGCCAGCATCAGTGAGGAAAAGTTGCG
5310684
5310685
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GCCGCTTCAGTGCGGAGCCGCGCTACTGCATCTTCCAA
5310756
5310757
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CAGAGGAGAGCGCCAGCCAGTAGAGCAGCAAAACCAGTG
5310829
5310830
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGCCAGCCATTTCCAGCTTGTAGGCGGTCTTTTGTT
5310899
5310900
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTGCTGAGGCTGACGCGGCAACTGGCGACGGGC
5310966
5310967
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GTCATGATTCGGATGTGGCTGTTTTACGTGATTTGTGGGCAG
5311042
5311043
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCTGGATGGTAGAACTCTTTCTTGTTCATGTAGTACAGG
5311115
5311116
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TAGTTTGGGCAATTGTCTACTAATTTAGATGCCCCATTAAA
5311190
5311191
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GTACCAGAACAGCTACTTTCCCAGAATGCCCAGCACGT
5311262
5311263
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGTTACCCAGTAGAGGGCTACCCACGAGTAAGGATCGCCCGC
5311338
5311339
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TAACTGAACTTCAAAAGTCCCGTATTAGATACCACCTAGA
5311412
5311413
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTGCCGGAACCATCAAGTGAAGCTGCCTGCGAGAAATCGG
5311486
5311487
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ATTTGAGATTAATTTCAGCCCAACTTCTGAACGAG
5311555
5311556
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCCACATCAGGTGTGTAGCGAAACTGAAGCTGCACCATGCCA
5311631
5311632
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TAGGTGGGACTTAACTCAGTGAAGGTTTCATTCCTACGACTTT
5311708
5311709
CATCATCCCATTTCCCCCGCAAGGGGACGGAAAC
GCGATCGCCGGATTGAGTCAGCACGTCACCCAATTCGATTG
5311783
5311784
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCGTCGTATTCGTATTCCGAGACTTGAAGGGCAGT
5311852
5311853
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTACCACATCCTGCATCCCTACCAGACCATTAGGCG
5311923
5311924
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGGTCAGAGTAGAACGTGGCGGGGCGAATGTGGGCGAT
5311995
5311996
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGGCAATCAGTACGTGCTATAATCTGGTTAGTTGAGTAAA
5312069
5312070
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCTTCGTTTTGGCCCCTCTCAGGTATCTCAGGGTTTCTGAAA
5312145
5312146
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GCTATGGGATGCCTTCTACGGTCTAGGCATGTTGA
5312214
5312215
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTGCGGGGTGCGCGGTTGGGAAGCTCGCCAAAGTCAC
5312286
5312287
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGCTATGGGCCACGCGCCTCGCCCGGTGGCATCGGCT
5312357
5312358
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CAGGTGAAGCGGCGATCGCCCGCTCCGCCAACACCGCCTGAGG
5312434
5312435
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCTGAAACTTCTCCGCGTTTGTCGCACCGACGCTATCTA
5312507
5312508
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTTTTGGAAAAGAGAGCCAGACAGTATGACAAAAAAAA
5312580
5312581
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCCTACACCACGCAGTGGTGTATAATTCGCTACAGGCGA
5312653
5312654
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
AAAGAAATAGCGGAGACTTACTCCGCTAAAACAAGAG
5312724
5312725
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ACGAGAAGCAAGACCACGGTCAGCAAGAAAAGCATTACCA
5312798
5312799
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCTTGAATGAGCCTATCCAGATTTCAGAGTCAGACTTGATT
5312873
5312874
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTGAAGGTTATGGGGCTATCCCAACTGGACTACCTGCAAGCTCG
5312951
5312952
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCAATGACGTGTCGCGCGGGTCTAAGGTTGCCGTCACTCGTTA
5313028
5313029
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ATCGGTATGCTATATTGGGGCTGTGCCTAGAAAGC
5313097
5313098
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTGATTCAAGGTAGCCAAGTTGGTGATCTAGGGTTAGAAGGA
5313173
5313174
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GCCAACCTGCATTATCAGCTTGGCGATTGTGGTGGTGCTGG
5313248
5313249
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CATCTGACGATTGACATCAACTGTCACCCCTAGCAGGG
5313320
5313321
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGAAGCGGTATCGGTGGTCGTGACGGACAGGAACCTC
5313391
5313392
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGGCGAGATGGCGATCGCCGACGACGACGTACTGCT
5313461
5313462
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTCAGCACATGGTCACAGTCTTTTCTGAAACGTTTCTGTCTG
5313537
5313538
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCAAAACCCGTGGGACTATACGGACGAGTTCGACCAGA
5313609
5313610
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGGAAACGGTTAGGTGGCTTGAATGCTTGGCGCTTAATTT
5313683
5313684
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGGACAGGGCGCGGGCAAACCAATTTCATGCTGGGTAGGATT
5313759
5313760
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGGTACACTCGTTCTCAGTCCGACCGCGCCGCCCGCGCCCGTG
5313836
5313837
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTGATCTGCTCAAAACAAAAGGGCAAATCTCGGATATT
5313908
5313909
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GCGGCGGCAATAATGGTAGTTGTCCCAACTTTCAA
5313977
5313978
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TGTTGGTGCCGCCTGCGTCCAGGTGAATTATCAGACTGA
5314050
5314051
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CGAATACAATTGTCCCAGTTGGCGGCTTTGAAGGAGTCCAGTTT
5314128
5314129
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ACATCACGTTGCTGAGGTTTTAGAACTTTTTCTTTTCCGCACCG
5314206
5314207
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CCGCTGAGCAGACAGCCGCTCACGACATCGCCCATCCT
5314278
5314279
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTATAATGGTGGAATATCCAGATAAGTATGAATAATGCACT
5314353
5314354
TTTTCATCCCATTTCCCCACAAGGGGACGGAAAC
ACGTGGAAAAGTGGCTAGGCTACGAAATCGAGATAGCTACTAA
5314430
5314431
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CGAGTTTCTTAAGTTCCTCGCTGGACAGACCAATAAGGAA
5314504
5314505
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCGGGCCCGAAGCATCAAGGATTGAGCCATCAAA
5314572
5314573
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CGTCGGCTTTGGGTCATCCAATCGCTCTGGGGTTGGCAGAGG
5314648
5314649
TTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCGAACCGCATCCCCTCTACGATCAGAAATATTGG
5314717
5314718
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCGGTGCTGATTTCTTCGCCTGTGGACGTACCGCCTTGCAGCTTCAAAA
5314800
5314801
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CATAAGGGGAATGGCATCAAGTACCGCCCCTGATCT
5314870
5314871
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CTGATACGGCTCCCAAGCTGCCTATTCTGGTGGA
5314938
5314939
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
ATAAAAGCGGCGGCACTGCTTGCGACAGGTATGTCCCAGGGCAA
5315016
5315017
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CGGATAGCGTGAACACGACCGTCCCCGTTGCCGCGCTGCCG
5315091
5315092
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GCAGCTACTAGTTGTGTGGTGAGGGTTGGTTCCATTTCAG
5315165
5315166
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTTTGGGCGCGGCAACCATAGTTAACAAGCTCTA
5315234
5315235
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTGAAAGATACCTGGATTTTTTTTGCCTAGTCTGCAAACAGCGA
5315312
5315313
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TTTACAATTCCAGCTAGGCTACTATTGAGTACTTTAACAG
5315386
5315387
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCGATCCATCTTATAAGCAGATGAACTCTTCAGAATA
5315457
5315458
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
AGGTTAGGCATATCGCAGTCTCTCCGTCATCTTTAGA
5315528
5315529
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GTGATGCTGATCTCCAGCCCATCCACTTCAACCGTA
5315598
5315599
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
TCGCTCATAACCTTACGGATCTCTTCACGGGCATTGAAAATTGTAGTCAA
5315682
5315683
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
GGTTATTGCTCTGTTGTTCGTTTCCAAACTATCAAAAAA
5315755
5315756
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
AACAACACTACACGACGATCGGGTACACGGGCTGCTCTTACCG
5315832
5315833
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
CGGAAAGCAAACAATAGGTAACGCTAGACTTGGAGACATCCAAGCCTA
5315914
5315915
CTTTCATCCCATTTCCCCGCAAGGGGACGGAAAC
5315948
Left flanking sequence : Till position 5307637 (length
bp)
GCCCCTGACACAGTCCGGTAGCCTTTCATCCCCATTTCCCCCCGCAAGGGGGGACGGAAACGGTTTTTGA
GGGTCAATCTGAAATTATGTTTTAACATAA
Right flanking sequence : From position 5315948 (length
bp)
CCCCGGAGACAGTAAGTGCGTTTGCGACCCAGCAGCCTTGTTGCACGATGCGATCGCGCACCGTGGGCAC
AGACAGGTCTATCAACAAACGTGTCAAAAT
Print the CRISPR sequence : From position
bp To position
bp