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CRISPRs details
NZ_CP006953_1
Flanking alignement tool
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NZ_CP006953_1                                                                                                                 
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Strain :
Mannheimia varigena USDA-ARS-USMARC-1388 GCF_000521685
RefSeq :
NZ_CP006953 (chromosome circular)
CRISPR id :
NZ_CP006953_1
DR consensus (32 bp) :
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
Number of repetitions :
11
Begin Position :
733510
End Position :
734206
733510
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
ATATCCGCATTCCGCTCACGGAAAGGGTGATCGTG
733576
733577
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
GACTTCACCACAAACCCTTTGGCTTTCATTGTTT
733642
733643
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
TTCTTTGGCGATTTCTCCGCTCATTTCAACGAGAG
733709
733710
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
AATTTCTGTGCCTTGGGTAGCATCTTGCATTTTG
733775
733776
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
ATCGAAAAATCAAACAATGAGCAACACAAAGCAGA
733842
733843
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
CAACAACTCACGCAAAAAATGATTAGCGTGGGTG
733908
733909
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
TCGTCACCTACATACCAACGTCCTCCACGCCCGT
733974
733975
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
ATAGCCTAGGCTTACACCCTCATTTTCCTGCCGT
734040
734041
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
TGCGAATCTGTCATAAGTCATCACCGGTACGGTTG
734107
734108
GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC
AACCCCTTTTTCTCTATCTGTTAAAGACATAAAAA
734174
734175
GCGGTTACCTTCACGTAGCCATAAGTTGAAAT
734206
Left flanking sequence : Till position 733510 (length
bp)
CTCAATTTGAATTGTGCTATACTAAAAATACTTCCTATACAGGCGTTTAGCGAAAAGGCGGTAACAAAGC
CTTGCAGCACAATGCTTTTGCATATAGGGA
Right flanking sequence : From position 734206 (length
bp)
CTTGGCATTCAGATATAATTTCTTAGACATTTTGTAGCTATTTTTCATGTCACGATAATTGGAAATATAA
ATAAAGGTGCATTGCTGCACCTTTATTACT
Print the CRISPR sequence : From position
bp To position
bp