Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP006956_3                                                                                                                 top


Strain : Bibersteinia trehalosi USDA-ARS-USMARC-190 GCF_000521765 RefSeq :NZ_CP006956 (chromosome circular)
CRISPR id : NZ_CP006956_3
DR consensus (32 bp) : CCAGCTACGTACGCGTAGCTGTGAGTTGAAACNumber of repetitions :28
Begin Position : 1574284 End Position : 1576109

1574284CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTGCAAACAGCCCTAACAAGTGAATCATTGCCATT1574349
1574350CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTACGATTTAGTTACAAACACACGTTACGGTATGG1574415
1574416CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCCGAAGTCGTTATGTACTGAATGCCTATGAAGCGG1574482
1574483CCAGCTACGTACGCGTAGCTGTGAGTTGAAACAACTTGCTCAATAACAAATTGATTGACAATTTCAT1574549
1574550CCAGCTACGTACGCGTAGCTGTGAGTTGAAACAGGCTTTTTCCCTTGAGCCTTTAAACGCTTATTTT1574616
1574617CCAGCTACGTACACGTAGCTGTGAGTTGAAACGCAATCTGCCTGGCTAAATGAGAGTGCCACGTTG1574682
1574683CCAGCTACGTACGCGTAGCTGTGAGTTGAAACGTTGTTAGAGCGAGTGCCGTAATGAATTTTATTC1574748
1574749CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCCTAATAACCCTGATAAGGATTAAATTATGAACCT1574815
1574816CCAGCTACGTACGCGTAGCTGTGAGTTGAAACGCATCAATGGCGTGCCGTACTTAAGCCGTGATGATAC1574884
1574885CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCATCGCTTTGACTGTGCCTTAGAAGATACATCAG1574950
1574951CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCGCCAACTCGTCTTTCTTTTGCCAGCACTTCTAG1575016
1575017CCAGCTACGTACGCGTAGCTGTGAGTTGAAACATTTTAGGAGAAATCACCATGAAAAAAGCAATCT1575082
1575083CCAGCTACGTACGCGTAGCTGTGAGTTGAAACACGCATTTACACTCATTTGAAAGAAAAAGGCGAA1575148
1575149CCAGCTACGTACGCGTAGCTGTGAGTTGAAACGTGTAAAACCTGTACCAACGCTCGCGGTATAACG1575214
1575215CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTGGATTTAAGGTTGATTTTAGTGGGTTTAAGCT1575279
1575280CCAGCTACGTACGCGTAGCTGTGAGTTGAAACATCAGCCCCCGAACCTAAATCGTGGAAAAACGAT1575345
1575346CCAGCTACGTACGCGTAGCTGTGAGTTGAAACAATAGTGTTGTGGATATGTTTTCTGAATTTGCCT1575411
1575412CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCCGTTTAAGCGATGAAGAAGACTGCAGCGAAAGAA1575478
1575479CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTTTAAATGGCTGAAGGAATACGAATGAGGGCCTTA1575545
1575546CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTGGATAGTGTGTTGATTAACTTATACCAAAAAC1575610
1575611CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTCCTGCTGTATTGTCTTACGTTTTTTCGGGGCGA1575676
1575677CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCCTCATCGCCATAAATGGGGTTTTTACCAAATGGG1575743
1575744CCAGCTACGTACGCGTAGCTGTGAGTTGAAACCATCAGAATGATAACGGCGAGACTAACGGCTCTAC1575810
1575811CCAGCTACGTACGCGTAGCTGTGAGTTGAAACGTTGATACATCACCCTCTGCTGTAACATTACCGC1575876
1575877CCAGCTACGTACGTGTAGCTGTGAGTTGAAACACAAACCGCGGATAAGGCAAATCGCCATAGGATTT1575943
1575944CCAGCTACGTACGCGTAGCTGTGAGTTGAAACGACATCACGGTTTCATAGTAGCGCTCTCGCAATGG1576010
1576011CCAGCTACGTACGCGTAGCTGTGAGTTGAAACTCATCGGGCTTTAAGGTCAAGGCATTATCCAGTAA1576077
1576078CCAGCTACGTACGCGTAGCTGGTGAGCTAAAA1576109
Left flanking sequence : Till position 1574284 (length bp)
TTTATCTTTAACCTTATGCTATACTGAATCAGCCTATTTTAGGATATTAGCGAAAAAGAGGTTTTCGAGC
CTTGATTTGTAATGCTTTTTACCATAGGCA
Right flanking sequence : From position 1576109 (length bp)
TACTTTTTCCACAAACAAGAGTCTATTTAATGCTTACTCTATATTGCAAAATAATATGTATATCACAACG
TCTCCTTTGATTAATCTAGATAGCATGCGA
Print the CRISPR sequence : From position bp To position bp