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CRISPRs details
NZ_CP006965_3
Flanking alignement tool
Page manual
  
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NZ_CP006965_3                                                                                                                 
top
Strain :
Thermococcus paralvinellae ES1 GCF_000517445
RefSeq :
NZ_CP006965 (chromosome circular)
CRISPR id :
NZ_CP006965_3
DR consensus (30 bp) :
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
Number of repetitions :
33
Begin Position :
954068
End Position :
956265
954068
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TGGGTCACAATCAACTTCGAAGGCGACGCTGACAAGG
954134
954135
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
GCACCGCTCCAAGTCGGCAATGCATTGATGCTGTCAAG
954202
954203
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CTGATCACCGAGGCTAAGCTTTGATGGGTTGAGCAAT
954269
954270
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CGTAAGTATCGTTGAACTTAACCCAAACCAAGTAATT
954336
954337
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
GGTCTTGCAAAGCCAAGATACAGCTTCTATATACTCAT
954404
954405
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CTCCGCGGGGGGACTTAGATGTGAGGCTTAAGAAGTTTGC
954474
954475
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
ATCTTCCAGGACAAAGTGCATGGTCCAGGAAGATAT
954540
954541
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CATCGGCATTAGGATCCCAAAAGAGGTTGCCGAACTGA
954608
954609
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TCACTTTGAGGGTGTAGTTGCCCATCTTTGGCAGAGGAGT
954678
954679
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TGAAAAGTGCATGATAAAGCCTTAATCCACCCTTCTTCG
954747
954748
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
AGGAACTCGGAATAACAAAACAAAAACTCAAGAAGCT
954814
954815
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
ATAGCGAGCCGAGACAGGGAATAAAAGCTGATGTGGT
954881
954882
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CGTAAGTATCGTTGAACTTAACCCAAACCAAGTAATT
954948
954949
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TTGAGGAGTTAAGAGAGAAGGGCTACGAGGATGCACTA
955016
955017
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
GGGGAGAACAGAAAAGCCTAAGCATTGACGACGAAGTT
955084
955085
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CTAACTCTAAGATCGATTAAACTGTATTGCTGAGCGA
955151
955152
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CCCCAGCATGGGGATAGGGGTTAGGCGTCATAGGAAT
955218
955219
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CAATAACTTCCCTCTCAAGAGGTTCAGGATAGAAGTA
955285
955286
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
AAATGTTTTGCGATGAAGCTACAGCAATCTTTATTCA
955352
955353
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TTCGCTCTACTTAGAAGTTTTGCACCTTCCTCTATAAA
955420
955421
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TCTTACCGACATTTCATCAGGCTTGAACGAGAACAGA
955487
955488
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
AAGTAGAAAACAAAAAGGTTTTAGAGATTGAGCTTTT
955554
955555
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CCGTGCATTGTTCCCGCAATCCCCTTGCCAGGAACAATTAC
955625
955626
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CTCCGCCAACTCTTAGTATGCCTAAACCTCCCGAATCTCT
955695
955696
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TTGAAGACCGATTTGAGGCTGATTTTAGATGGAAAGG
955762
955763
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CGCCAAGTGCCCAAAGTACTACACAAAGAAAGAAGAC
955829
955830
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TCAATGCAAACCATCTGCCATCGTGCTTCACATCGTCT
955897
955898
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TCTCACCGACAACTATCATCGCCGTCATGATTTTTGT
955964
955965
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
TGAACCGCTATGGCAACCTTTGCCCCTGCTGCTACGT
956031
956032
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
CAATTACATGCTTAGAGAAGCTATTCTCAAGGTCGAGGT
956100
956101
ATTTCAATTCTTCTAAAGTCTTATTGAAAC
ACATCATTCACGATGAAGCTACAGCAATCTTTATTCA
956167
956168
ATTTCAATTATTCTAAAGTCTTATTGAAAC
TTCGCTCTACTTAGAAGTTTTGCACCTTCCTCTATAAA
956235
956236
ATTTCAATTCTTCTAAAGAAGAATTGAAAT
956265
Left flanking sequence : Till position 954068 (length
bp)
ATAAAAGGGAAACACTCGGGTTTGAAAGAATTGATGTCTATAAGTTCAAAGAGGGAAAGGTAGTTGAGAA
GAAAACTTTTGTGAGAAGAGTATGAGCTAG
Right flanking sequence : From position 956265 (length
bp)
CCTTTCCATCTAAAATCAGCCTCAAATCGGTCTTCAAGTTTCAATAAGACTTTAGAAGAATTGAAACCCT
TTCCATCTAAAATCAGCCTCAAATCGGTCT
Print the CRISPR sequence : From position
bp To position
bp