Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007028_6                                                                                                                 top


Strain : Thermocrinis ruber GCF_000512735 RefSeq :NZ_CP007028 (chromosome circular)
CRISPR id : NZ_CP007028_6
DR consensus (23 bp) : GTTTCAATCCCCTATAGGCACTTNumber of repetitions :11
Begin Position : 906220 End Position : 906907

906220GTTTTAATCCCCAATAGGCACTTGATAAACATACAAGGCAGTGGTGCAGAACTCTGCAAAAAAGCTA906286
906287GTTTCAATCCCCTATAGGCACTTAATAAACATGAAGGCATAGACTTTCATCACGCTAACCTCCTGAC906353
906354GTTTCAATCTCCTATAGGCACTTAATAAACCGAATTTGACCCTCTACCTACTGTGCTCCCTGCATA906419
906420GTTTCAATCCCCTGTAGGCACTTAATAAACAAGCGGGCTTGATAAGCTTGAAGCGAGAATCAAGTT906485
906486GTTTCAATCCCCCATTAGGTACTTGATAAACTTCGGGAAATTATTTTAGTCAAATTTTCCAGAATGT906552
906553GTTTCAATCCCTACTAGGTACTTAATAAACCTTCAGGTAAAGATGCTGGATCGGACTCTACAAGTTC906619
906620GTTTCAATCCCCTATAGGCACTTTATAAACGGTCATTGCCTCCAAATATTTTTTTTTGTGCTGTTTG906686
906687GTTTCAATCCCCTATAGGTACTTAATAAACCCACCGCACCATCAGGCAGAATGTCTTGTTCAGATA906752
906753GTTTCAATCCCCTATGGGCACTTAATAAACTTTGTTTGCGAAAGAAAGCGTGGGTGCGGAGGTGTA906818
906819GTTTCAATCCCCTATAGGCACTTAATAAACTTTGTTTGCGAAAGAAAGCGTGGGTGCGGAGGTGTA906884
906885GTTTCAATCCCCTATAGGCACTT906907
Left flanking sequence : Till position 906220 (length bp)
CAATCCTGTTAATTTGTTAATATGTTGATAAGCTTGTTTATTAACATATTAGCCAAATAATCAGCTGAGG
CCGTTCTATAAATTTACAAGTTCTGAAGAT
Right flanking sequence : From position 906907 (length bp)
AATAAACCAGACATTCGCATTATCTATCATATTCAGTTGCCAACTTAGAGACAAGGGACTTTTAAGAGTC
CCTCTACTTCATTGCCCTCATGACTATTAT
Print the CRISPR sequence : From position bp To position bp