Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007029_12                                                                                                                 top


Strain : Thioalkalivibrio paradoxus ARh 1 GCF_000227685 RefSeq :NZ_CP007029 (chromosome circular)
CRISPR id : NZ_CP007029_12
DR consensus (28 bp) : TTTCTGAGCTGCCTGCGCGGCAGCGAACNumber of repetitions :94
Begin Position : 2977326 End Position : 2982937

2977326TTTCTGAGCTGCCTGCGCGGCAGCGAACTAGTAGAACCTGAATCTGATTGACGAGGTTTT2977385
2977386TTTCTGAGCTGCCTGCGCGGCAGCGAACGGCGCGATCACGCCGAACGGCGAGGACAACGA2977445
2977446TTTCTGAGCTGCCTGCGCGGCAGCGAACGGCGCTGTTCGCCAACGGCGAAGAGGGTGTTT2977505
2977506TTTCTGAGCTGCCTGCGCGGCAGCGAACATCGGTGCCACATCATCCCCGCCCGGGGCGTA2977565
2977566TTTCTGAGCTGCCTGCGCGGCAGCGAACCCGGTGTCGGCGATCCGCGCGCACCTGCACGA2977625
2977626TTTCTGAGCTGCCTGCGCGGCAGCGAACGAACCTCGGGAGTACAGGCGAGACGAGCTAGA2977685
2977686TTTCTGAGCTGCCTGCGCGGCAGCGAACGGAAACCGAAATGTTCGGCGGGGTGGCGGGCT2977745
2977746TTTCTGAGCTGCCTGCGCGGCAGCGAACCAGTACGCCGGCGGCCCCGTGTTCGTGGGTGT2977805
2977806TTTCTGAGCTGCCTGCGCGGCAGCGAACGAGCTCGGCGGCCATCTGCACGCGCTTGCCGA2977865
2977866TTTCTGAGCTGCCTGCGCGGCAGCGAACTTTTTCTCTTCGCGCCGTTGCGAGATGAATAA2977925
2977926TTTCTGAGCTGCCTGCGCGGCAGCGAACGGGAGCGGATGAGGGAAGCCGAAGCCGGCAAA2977985
2977986TTTCTGAGCTGCCTGCGCGGCAGCGAACGGGCTTCGCGCGCTTTTTGACTACCTCTCCGA2978045
2978046TTTCTGAGCTGCCTGCGCGGCAGCGAACTGGGAAGACTCCGAACTATATTGTGATCACTGC2978106
2978107TTTCTGAGCTGCCTGCGCGGCAGCGAACTTTCTCGAGGCGAACATCGACGCGCTCATCGA2978166
2978167TTTCTGAGCTGCCTGCGCGGCAGCGAACCAAGGGCCCGACGCCCCGGCGAGCGAGGAAGG2978226
2978227TTTCTGAGCTGCCTGCGCGGCAGCGAACGATTTCAGCAAAATCGAACTCCTGCTCTCGAT2978286
2978287TTTCTGAGCTGCCTGCGCGGCAGCGAACGACGCGATCGCCGCCGAATGCCGGCGCGTGAT2978346
2978347TTTCTGAGCTGCCTGCGCGGCAGCGAACATTTTCGAGAACACCCGCTCTACGGCCTCATG2978406
2978407TTTCTGAGCTGCCTGCGCGGCAGCGAACCGGGAGATCGTCGACCAGGTCCAAACGCTGGA2978466
2978467TTTCTGAGCTGCCTGCGCGGCAGCGAACCTGCACGACGCCGTCCAGGTCGAGCATCTGCA2978526
2978527TTTCTGAGCTGCCTGCGCGGCAGCGAACGTAATGCAGGGGTAAATCGGCCTTGTGCCGCAG2978587
2978588TTTCTGAGCTGCCTGCGCGGCAGCGAACATCCCCGAGGGCATGCGCATCGAATACCTCGA2978647
2978648TTTCTGAGCTGCCTGCGCGGCAGCGAACCACCAGCACGTTGCGCGCTCCGATCGCGAGCA2978707
2978708TTTCTGAGCTGCCTGCGCGGCAGCGAACACTTGCCCATGCGCGTTGCGAAGTCATCCTCG2978767
2978768TTTCTGAGCTGCCTGCGCGGCAGCGAACGTATGACGAGGCGGTGCGCCGAATTGAGCAGA2978827
2978828TTTCTGAGCTGCCTGCGCGGCAGCGAACGTCCTGCTGGAAGCGGAGACGGAACGCGTCGA2978887
2978888TTTCTGAGCTGCCTGCGCGGCAGCGAACGGATACGGCGGTTTTGGGCGGTGCTGGTGGGT2978947
2978948TTTCTGAGCTGCCTGCGCGGCAGCGAACCGCGGAGTTGTCCGCCGAACTGAACCGCCTGC2979007
2979008TTTCTGAGCTGCCTGCGCGGCAGCGAACTATGAGTGGCTGGAGCCCACCGACCCATCGCA2979067
2979068TTTCTGAGCTGCCTGCGCGGCAGCGAACCAGAAGGACAAGATTGCTTGGTTCCGCGCGCA2979127
2979128TTTCTGAGCTGCCTGCGCGGCAGCGAACCTGAAGGGCCGCAATCTCGCGGACCCAGCACGC2979188
2979189TTTCTGAGCTGCCTGCGCGGCAGCGAACATCACACTCAAGCCATGCGCGGATCGGCGTAT2979248
2979249TTTCTGAGCTGCCTGCGCGGCAGCGAACCGTTTCCCGCGCTGCGATCATCCGCCTGGAGC2979308
2979309TTTCTGAGCTGCCTGCGCGGCAGCGAACATCTGGTAGGCGTAGAGGAGGCCCCCGCTCAT2979368
2979369TTTCTGAGCTGCCTGCGCGGCAGCGAACTCCTCGATGCATTCCGGCGGTTCGGGGTCGAT2979428
2979429TTTCTGAGCTGCCTGCGCGGCAGCGAACTTCGAGGTCTTCGACTTCCTGCACGTCGAGCA2979488
2979489TTTCTGAGCTGCCTGCGCGGCAGCGAACTTTTACGCACACATCACGGGCGACGCCTACAA2979548
2979549TTTCTGAGCTGCCTGCGCGGCAGCGAACGTTGCTCCGGTTGGCCGGCGGCTACGGCCTTC2979608
2979609TTTCTGAGCTGCCTGCGCGGCAGCGAACAGCGCCGCCCGGGCCGCCGCGCAGATCCACCA2979668
2979669TTTCTGAGCTGCCTGCGCGGCAGCGAACCCGATCTGTGCTGGTGCACACGTCTACTCACG2979728
2979729TTTCTGAGCTGCCTGCGCGGCAGCGAACTGAAAATTATTTTTTGTCTGCGTGTAACGCAT2979788
2979789TTTCTGAGCCGCCTGCGCGGCAGCGAACCTGATGCCCGGCATCTGCCTGACCGACAGCCA2979848
2979849TTTCTGAGCTGCCTGCGCGGCAGCGAACACGGTGGCCATGCAGCGCGCGCAAACGGTGGT2979908
2979909TTTCTGAGCTGCCTGCGCGGCAGCGAACGTCACCGGGTCATAGCGGCCGCTGCGCCACCA2979968
2979969TTTCTGAGCTGCCTGCGCGGCAGCGAACGGGTCGGCGTGCCGCTGGCCGCCTCGGCCCGG2980028
2980029TTTCTGAGCTGCCTGCGCGGCAGCGAACCCGAACATCTGAGATGGACACTGCATTCTCGT2980088
2980089TTTCTGAGCTGCCTGCGCGGCAGCGAACACCACGCGCGCGACCGTGGTGCATCGGGGCGA2980148
2980149TTTCTGAGCTGCCTGCGCGGCAGCGAACCCGCGCATCGACGCGCTGCAGGTTCGGCAGGA2980208
2980209TTTCTGAGCTGCCTGCGCGGCAGCGAACGTCACCGGGTCATAGCGGCCGCTGCGCCACCA2980268
2980269TTTCTGAGCTGCCTGCGCGGCAGCGAACAGCGAGCCCCGCCACGACGTTTCTCGGCTGGT2980328
2980329TTTCTGAGCTGCCTGCGCGGCAGCGAACCTGGTGATTCCGCCGGGCCCGGACCCGGCAAC2980388
2980389TTTCTGAGCTGCCTGCGCGGCAGCGAACGAGGCGGAGTTCTCCGCCCGGCAGAACGAGCT2980448
2980449TTTCTGAGCTGCCTGCGCGGCAGCGAACCTGGAAGCGGTCGCCCTTGAGGCGCAGCACGCG2980509
2980510TTTCTGAGCTGCCTGCGCGGCAGCGAACGTGCTCGAGGCTCACGGCTCGGCTCAGGCCCA2980569
2980570TTTCTGAGCTGCCTGCGCGGCAGCGAACATCGAAGGGGTTTCGGATCGCGCATCGGAAAT2980629
2980630TTTCTGAGCTGCCTGCGCGGCAGCGAACCACGGACCCGGGGTGCTGGGGCGCTTCGAGCT2980689
2980690TTTCTGAGCTGCCTGCGCGGCAGCGAACCAGCAGCGCACCGCGCAGCAACTCCTCGATGA2980749
2980750TTTCTGAGCTGCCTGCGCGGCAGCGAACTCGCGCCGTGGGATCCCACCGCGCCCCTTCGT2980809
2980810TTTCTGAGCTGCCTGCGCGGCAGCGAACAACACCCGGACGCAAAGCAGGCGGACGCTACAT2980870
2980871TTTCTGAGCTGCCTGCGCGGCAGCGAACCTTGTGCGGCGCATGCAGTACTCCTGACTTAG2980930
2980931TTTCTGAGCTGCCTGCGCGGCAGCGAACAGTTCCTCCGCTCGCAAGGACAATATGCCCGA2980990
2980991TTTCTGAGCTGCCTGCGCGGCAGCGAACATGATGCGCACGCGATCGCCCCACAACAGCAT2981050
2981051TTTCTGAGCTGCCTGCGCGGCAGCGAACGCCGCTCGGGGTGCAGGCGGAACCAGGCGTG2981109
2981110TTTCTGAGCTGCCTGCGCGGCAGCGAACCGGTAAAGGCCCTGCTCGACGGCCTCCGCGAA2981169
2981170TTTCTGAGCTGCCTGCGCGGCAGCGAACGGGATGATCACGCGGGCCTTGTCGCCGTCCTG2981229
2981230TTTCTGAGCTGCCTGCGCGGCAGCGAACGGATTGCTCGAGCTCGGACCAGATGCCCCGGA2981289
2981290TTTCTGAGCTGCCTGCGCGGCAGCGAACGTCGGTGTAGTTCTCGACGAATTCGGCGGAGA2981349
2981350TTTCTGAGCTGCCTGCGCGGCAGCGAACTTCTGCCCCGATCAGGGCGACTCGACGACGTA2981409
2981410TTTCTGAGCTGCCTGCGCGGCAGCGAACCTCGAGCATCGTCAGATGCGCCGTGGCGGTCA2981469
2981470TTTCTGAGCTGCCTGCGCGGCAGCGAACGAATGCGTCGTCGTAGCTCAGTCCCTCACTGA2981529
2981530TTTCTGAGCTGCCTGCGCGGCAGCGAACCGTTGTTCGGGAGCAGTTCGCTTGCCCGGCCA2981589
2981590TTTCTGAGCTGCCTGCGCGGCAGCGAACCCGTTCGCACAAGTGCAGCCGTCCTCCGTGGT2981649
2981650TTTCTGAGCTGCCTGCGCGGCAGCGAACGCCGAGGTATCCCGCCGACTCAAGGCGCTGAA2981709
2981710TTTCTGAGCTGCCTGCGCGGCAGCGAACATATCAGCGCCACAACGATGAAGCGGGTTGCA2981769
2981770TTTCTGAGCTGCCTGCGCGGCAGCGAACCGCTTGCGTGGACGCCGGCCAGCAGCGACAGC2981829
2981830TTTCTGAGCTGCCTGCGCGGCAGCGAACCGGATCAGAACTGCGGCTGGCGGCCCGTCTTC2981889
2981890TTTCTGAGCTGCCTGCGCGGCAGCGAACGGCGATCTGGCTCTTGAGTTTCGGCGGTACAA2981949
2981950TTTCTGAGCTGCCTGCGCGGCAGCGAACCCGGCCTAACCCCTACCGAGGGCGCTCCTGGA2982009
2982010TTTCTGAGCTGCCTGCGCGGCAGCGAACCACGACGTGCGTTGTGTGCTTGGCGGGCACGA2982069
2982070TTTCTGAGCTGCCTGCGCGGCAGCGAACCCACTCCCAGGGCAAGCTTGGGTAGCGCGGCA2982129
2982130TTTCTGAGCTGCCTGCGCGGCAGCGAACGACTGAAGCTGCGCGTGGTGTCCACCCCCAAC2982189
2982190TTTCTGAGCTGCCTGCGCGGCAGCGAACTGGCCCGGTGTGTATCGCCACGTAGTGCGCCA2982249
2982250TTTCTGAGCTGCCTGCGCGGCAGCGAACGCCCGGCGCATCCGCGAGCTCAAGCAGCTCAT2982309
2982310TTTCTGAGCTGCCTGCGCGGCAGCGAACGGCGCGCAGATAGCGGGGTTCGAGCTCGTGCA2982369
2982370TTTCTGAGCTGCCTGCGCGGCAGCGAATAAAGGATATGCCCGCCATCAGGCGGAGTACGT2982429
2982430TTTCTGAGCTGCCTGCGCGGCAGCGAACGGTGGCGCCGGCCTGGGCCTGGGCGAGCGACA2982489
2982490TTTCTGAGCTGCCTGCGCGGCAGCGAACGCGGTCCCCAGCATCCTGGCCGACCGCCTGAT2982549
2982550TTTCTGAGCTGCCTGCGCGGCAGCGAACGTGCGACTCATCCGCAAGCACTTCCCCGACCA2982609
2982610TTTCTGAGCTGCCTGCGCGGCAGCGAACAACTCAGCGCGACGACGCGGCGCCCGGTGTTG2982669
2982670TTTCTGAGCTGCCTGCGCGGCAGCGAACGCGGGGTTCGAGCTCGTGCAGGATGCGCCGCG2982729
2982730TTTCTGAGCTGCCTGCGCGGCAGCGAACAATGCATGATCTGCTAGTTTCACGAATCATAT2982789
2982790TTTCTGAGCTGCCTGCGCGGCAGCGAACCGCTGGAGCAGGGCGCTCGCACTCGCCCAGCA2982849
2982850TTTCTGAGCTGCCTGCGCGGCAGCGAACAGCCTCGTGCAATCCGAGCTGTTCCAGGCCAT2982909
2982910TTTCTGAGCTGCCTGCGCGGCAGCGAAC2982937
Left flanking sequence : Till position 2977326 (length bp)
CCACCGAAGGAACATGCCCAAACGCCAGCCCTGATGGTCGCTCAGGCGGCATGAAAAAGCGGACAACTAC
GTTGACAAACACCGGAAGCGCCAACAAGCA
Right flanking sequence : From position 2982937 (length bp)
TAGCGCTCTACTTCTCTATATTCCTGATTGTTAAAGAATAAATCGGCTCACTGCACGTTTCACCCAATTG
GGCCCATAGGATTATAACGTGTTGATTTTT
Print the CRISPR sequence : From position bp To position bp