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CRISPRs details
NZ_CP007141_1
Flanking alignement tool
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NZ_CP007141_1                                                                                                                 
top
Strain :
Pseudothermotoga hypogea DSM 11164 = NBRC 106472 GCF_000816145
RefSeq :
NZ_CP007141 (chromosome circular)
CRISPR id :
NZ_CP007141_1
DR consensus (30 bp) :
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
Number of repetitions :
15
Begin Position :
1057386
End Position :
1058399
1057386
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
TTTGGTTCCTGCAATAGCAAAGAGAAGAAGCACTGGAA
1057453
1057454
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
TCTTAAATTGTTTCGTGAGCTCAAAGTGTCTTGATCCCGA
1057523
1057524
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
GGGAATTTGACAGAGTGTGTTGGTGAAAGGAGGCGAATAGCATGTT
1057599
1057600
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
ATCTTGAAGATCTAAAGGCGTGAGCGGAAACGCTCA
1057665
1057666
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
ACGAGAAGGCGCAGTTACTTAAGGAGATTGAAAGACTG
1057733
1057734
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
TCCTTTTTCCTTATGGCGTGTACTATGGGATAGTGAAGAAGG
1057805
1057806
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
ACGAGAAGGCGCAGTTACTTAAGGAGATTGAAAGACTG
1057873
1057874
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
ATTTTCACAGCGAACGCGGTTCTTTGGGTATTTCTTCA
1057941
1057942
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
TCCCGAGTCCTATTATGACGTTGTTTTGTGCCATGA
1058007
1058008
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
GCGTTTGAAATCGCCATGTTGTTCGCCAAACTCGGCATGAACTT
1058081
1058082
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
TTTTAAATGCACGGTTGAAAACATAGTTCATACTGAT
1058148
1058149
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
GCGGAGGTATGATGAGAGTACGAGAGATTCAGGATTGGAT
1058218
1058219
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
GGGAATTTGACAGAGTGTGTTGGTGAAAGGAGGCGAATAGCATGTT
1058294
1058295
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
AAGAACTTGCAAGAAAAAAGAACTACGATCTAAATTGCATGTTGC
1058369
1058370
GTTTCCATCCCTCATAGGAGCCTTCTAAAC
1058399
Left flanking sequence : Till position 1057386 (length
bp)
GTGGATTAGTTCCGACACGGACGTCCATTTCCAGCCATTATAAGGCCTTCCAAACCCGGCCCGATTCAAA
GAAACAGAAGCCATTACAATCTTGACGGCA
Right flanking sequence : From position 1058399 (length
bp)
CCGTGGAAGTGGCTTTATTATTAAGACGGCACTTTTTGAGTCGAGACGATGTTACATTCGACCTTTTTGG
AAGTGCCCTTCTGTTGAAGCTTTTCGAAAA
Print the CRISPR sequence : From position
bp To position
bp