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CRISPRs details
NZ_CP007141_2
Flanking alignement tool
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NZ_CP007141_2                                                                                                                 
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Strain :
Pseudothermotoga hypogea DSM 11164 = NBRC 106472 GCF_000816145
RefSeq :
NZ_CP007141 (chromosome circular)
CRISPR id :
NZ_CP007141_2
DR consensus (30 bp) :
GTTTCCATCCCTCATAGGACCTCTCTAAAC
Number of repetitions :
12
Begin Position :
1072791
End Position :
1073604
1072791
GTTTCCATCCCTCATAGGACCTCTCTAAAC
CGGCAACGGCAATGGCTCATACAACAGACCCGCAGAAAATAA
1072862
1072863
GTTTCCATCCCTCATAGGACCTCTCTAAAC
CGTAACATTGTATGCGTATTAGACAAAGGAGGCACAGAAGGT
1072934
1072935
GTTTCCATCCCTCATAGGACCTCTCTAAAC
GCCGCTTTTTCGGCTGGCACTTGCTCGACGTTGAAACTGAAC
1073006
1073007
GTTTCCATCCCTCATAGGACCTCTCTAAAC
CGTAACATTGTATGCGTATTAGACAAAGGAGGCACAGAAGGT
1073078
1073079
GTTTCCATCCCTCATAGGACCTCTCTAAAC
GCCGCTTTTTCGGCTGGCACTTGCTCGACGTTGAAACTGAAC
1073150
1073151
GTTTCCATCCCTCATAGGACCTCTCTAAAC
TGTGGCTGGAAGAGAATCGAAGTGGGATAAGATAGACGAGCTTT
1073224
1073225
GTTTCCATCCCTCATAGGACCTCTCTAAAC
ATGGAGTATGGACGGGTGAGCGAAACGCTCACCCGTTT
1073292
1073293
GTTTCCATCCCTCATAGGACCTCTCTAAAC
TGGTACCATTGGCGTATTTCATTGACCCGATAGA
1073356
1073357
GTTTCCATCCCTCATAGGACCTCTCTAAAC
AGGAATATTTCAGCTGGCTGATAGCTATGTTTTTCAACACCGAGAT
1073432
1073433
GTTTCCATCCCTCATAGGACCTCTCTAAAC
CTTCGATTATTTCAAAAGACTATGTGTTCGACTCTGCAAATCTG
1073506
1073507
GTTTCCATCCCTCATAGGACCTCTCTAAAC
TGCCAGTTGTGCGTGTCGAAAACGCCGTTCAAACACTC
1073574
1073575
GTTTCCATCCCTCATAGGACCTCTCTAAAC
1073604
Left flanking sequence : Till position 1072791 (length
bp)
CATTTCAGGAAAGATCTCCATTCGGACCGATGCAGTTGGGTCCCCATAGGACTTCTCTGAACTTTTTCCG
AATCTTCGGAAGGAAACTTTCTGTGTGCTC
Right flanking sequence : From position 1073604 (length
bp)
CCCGTAGAAGTGGCTCTATTACTGACAAAGCAGTTTGTTGCAAAGGACGATGTTACATTGGACGTTTCGA
GAAGGACCCTTGTAATGAGAACTTTCGAAA
Print the CRISPR sequence : From position
bp To position
bp