Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007223_4                                                                                                                 top


Strain : Thermosipho sp. 1063 GCF_001941365 RefSeq :NZ_CP007223 (chromosome circular)
CRISPR id : NZ_CP007223_4
DR consensus (30 bp) : GTTTCCATTCCTCATAGGTATGTTCTAAACNumber of repetitions :28
Begin Position : 909396 End Position : 911235

909396GTTTCCATTCCTCATAGGTATGTTCTAAACATGATATTATGGCAAAATTTATTAATTTAACACCACACAC909465
909466GTTTCCATTCCTCATAGGTATGTTCTAAACATTGTATATAGCAGCTGATTTAAAATTTACAGA909528
909529GTTTCCATTCCTCATAGGTATGTTCTAAACGAAAAAGAGAATTTTTAGAAACATTTGAAGATTTTA909594
909595GTTTCCATTCCTCATAGGTATGTTCTAAACGGGAAAATATGGTAATTAAAGTAATAAGAAATAAAAA909661
909662GTTTCCATTCCTCATAGGTATGTTCTAAACGAAAAATTAAGGATCTTCCGAAATGATATTCGGGAGATTCTT909733
909734GTTTCCATTCCTCATAGGTATGTTCTAAACAAAAAGAGGAGGGGATGTCATGGAAGTCAAAATATTGA909801
909802GTTTCCATTCCTCATAGGTATGTTCTAAACTAGTAGGATATGGTTTCGTTGGCAAGGAACATCATA909867
909868GTTTCCATTCCTCATAGGTATGTTCTAAACTATTAAGTCGATTATATGCGCGACAGGAAGAATTG909932
909933GTTTCCATTCCTCATAGGTATGTTCTAAACTATTAAGTCGATTATATGCGCGACAGGAAGAATTG909997
909998GTTTCCATTCCTCATAGGTATGTTCTAAACTGGAAATGGTTGGATGAAAATTTATCAGATGTTTTCAT910065
910066GTTTCCATTCCTCATAGGTATGTTCTAAACTTATTCAATTTAGCAATAGGCAACAAATGTTATAT910130
910131GTTTCCATTCCTCATAGGTATGTTCTAAACATGATAGAATGGGTTTAAAGATTAAGTCTATTTTTAGAAA910200
910201GTTTCCATTCCTCATAGGTATGTTCTAAACTCGAAGGTGGCGTGATTGAGATAATAAATATAATA910265
910266GTTTCCATTCCTCATAGGTATGTTCTAAACTGTGCTTGAGGATCAAATCGGTTCTCAGAAATGG910329
910330GTTTCCATTCCTCATAGGTATGTTCTAAACAAATTGCAGAAATATTGAAACGATATATGGAAGACG910395
910396GTTTCCATTCCTCATAGGTATGTTCTAAACAAAATGTGCTTGATCAAATCAGTTCTCAAAAATGGAGAGA910465
910466GTTTCCATTCCTCATAGGTATGTTCTAAACAAAAAAATATCAGAAATATTAAAACAATATATGGAAGACG910535
910536GTTTCCATTCCTCATAGGTATGTTCTAAACAAATTTTGGAAGCTCCTATTATAGATGATTTTAATA910601
910602GTTTCCATTCCTCATAGGTATGTTCTAAACCATGAGAAAAGAAATCGAAAAGAAAATTTGGAAATGGCT910670
910671GTTTCCATTCCTCATAGGTATGTTCTAAACTGAAGTTAAAGTTTTTGAAAAAGACGCAGAAATCAGTCG910739
910740GTTTCCATTCCTCATAGGTATGTTCTAAACATTATTATGATATTTGTAGAAAAATTTACTGTTCAATA910807
910808GTTTCCATTCCTCATAGGTATGTTCTAAACTGAAATAACGGACGTGATAAAAATATTCCCCTTCG910872
910873GTTTCCATTCCTCATAGGTATGTTCTAAACTATTTAGATATGCCAATCAGCAACAGAACGATAA910936
910937GTTTCCATTCCTCATAGGTATGTTCTAAACATAAATTTAAATAAAGGTGTTTTTTACAGATTATATAG911004
911005GTTTCCATTCCTCATAGGTATGTTCTAAACTCGCCGCCAATGCCACCGTCGTAATGGCGGTGGCC911069
911070GTTTCCATTCCTCATAGGTATGTTCTAAACGAAATGGTTGGATGAAAATTTATCGGATAGTTTCATGG911137
911138GTTTCCATTCCTCATAGGTATGTTCTAAACAATTATTGACGGTTTTCAGAAGTTGAAAGAGAAAATTC911205
911206GTTTCCATTCCTCATAGGTATGTTCTAAAC911235
Left flanking sequence : Till position 909396 (length bp)
TCTATCTCCGAATATGTTTTTCACTATTCCTATTATCTGTTCTATTCTGTACTTGATTTTTTAATAATTT
TCTTTGATTTTTGTACACACACACAATGAA
Right flanking sequence : From position 911235 (length bp)
CAATTAAAAATCTCATAAATTATTATAAACCACATTATTTTCGTTTTGATTAACTAGAAGTTACCTGAAA
GTAAACACATTATTTTAAGCCATATACAAG
Print the CRISPR sequence : From position bp To position bp