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CRISPRs details
NZ_CP007523_4
Flanking alignement tool
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NZ_CP007523_4                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-0870 GCF_000973645
RefSeq :
NZ_CP007523 (chromosome circular)
CRISPR id :
NZ_CP007523_4
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
35
Begin Position :
3778345
End Position :
3780448
3778345
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ATCTTCATATTGCGTGACGCTGCCGATGAACG
3778405
3778406
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTTTATCAGCTAACCATTTCCAGAACTCGTC
3778466
3778467
CGGTTTATCCCTGCTGGCGCGGGGAACAC
TATAATATGAATTAATTTTTGCGCATAACCTG
3778527
3778528
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
3778588
3778589
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTAATGGGCTACCTGAACTTCACATATCC
3778649
3778650
CGGTTTATCCCCGCTAGCGCGGGGAACAT
ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
3778710
3778711
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGTATTCGTCACACAGCCCCGTCCAGAAATGA
3778771
3778772
CGGTTTATCCCCGCTGGCACGGGGAACAC
TAACGAACTGAATAAAATGTCAGAAAGTGACG
3778832
3778833
CGGCTTATCCCCGCTGGCGCGGGGAACAC
GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
3778894
3778895
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
3778955
3778956
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGATAAACAACCGCATAGCCTCTTTCGTTT
3779016
3779017
CGATTTATCCCTGCTGGCGCGGGGAACAC
TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
3779077
3779078
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TATTTCGCCTTCGGCACTGACGTCACCGTCAA
3779138
3779139
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
3779199
3779200
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCGAATCGAAACCCCAGCCACAGAAATAATT
3779260
3779261
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCGAATCGAAACCCCAGCCACAGAAATAATT
3779321
3779322
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
3779382
3779383
CGGTTTATCCCCGCTAGCGCGGGGAACAC
AATCGCCAGCCTCGGAAATATTCCATCCTCCG
3779443
3779444
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
3779504
3779505
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGCACTATGAACGGATCGGCGCTGATGCCGG
3779565
3779566
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGTAAAGCCACACCATTTTTTATTGACCTCGC
3779626
3779627
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTAGGAGGCGTAATGAATACTACGTATCAAAA
3779687
3779688
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
3779748
3779749
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGACGTGGACGAGGAGTTACTCAACCGCTGC
3779809
3779810
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGCGCCACATGGCCCACCGGCACCACCCGATC
3779870
3779871
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AAATGACCAAATCAGAAATCTTCACCAAAGCC
3779931
3779932
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
3779992
3779993
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAGTCCGGGGGTTATATAGTTATTTAATGAGC
3780053
3780054
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTGGGCGTCGGTTTTTTCAGGTTTAGGTCCGG
3780114
3780115
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCAACTGTCAGTTCGTCGTTAGCCAGTAATTC
3780175
3780176
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTGAAAACGCATGGAATCCGGTATAAACAGTC
3780236
3780237
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATGTAACTGATAGCGAAATATATTGGGATAA
3780297
3780298
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAAACGTAAACAGGGTAAGATACAACTCTGCA
3780358
3780359
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGTAAAGGGTGGTCTGGAAGGGGATCGGCAAA
3780419
3780420
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3780448
Left flanking sequence : Till position 3778345 (length
bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3780448 (length
bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp